RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 LCE5AQ5TCM9 118 aa8.03□□□□□ -1.12
HOXA3-205ENST00000522456 LCE3AQ5TA76 89 aa8.02□□□□□ -1.13
HOXA3-205ENST00000522456 KRTAP19-3Q7Z4W3 81 aa8.01□□□□□ -1.13
HOXA3-205ENST00000522456 KRTAP4-9Q9BYQ8 210 aa8.01□□□□□ -1.13
HOXA3-205ENST00000522456 A6NED7 52 aa7.98□□□□□ -1.13
HOXA3-205ENST00000522456 MT1GP13640 62 aa7.84□□□□□ -1.15
HOXA3-205ENST00000522456 KRTAP25-1Q3LHN0 102 aa7.84□□□□□ -1.15
HOXA3-205ENST00000522456 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
HOXA3-205ENST00000522456 LCE1DQ5T752 114 aa7.79□□□□□ -1.16
HOXA3-205ENST00000522456 MT1LQ93083 61 aa7.79□□□□□ -1.16
HOXA3-205ENST00000522456 KRTAP12-3P60328 96 aa7.73□□□□□ -1.17
HOXA3-205ENST00000522456 HMCN1Q96RW7 5635 aa7.72□□□□□ -1.17
HOXA3-205ENST00000522456 MT1MQ8N339 61 aa7.7□□□□□ -1.18
HOXA3-205ENST00000522456 LCE4AQ5TA78 99 aa7.67□□□□□ -1.18
HOXA3-205ENST00000522456 MT4P47944 62 aa7.65□□□□□ -1.18
HOXA3-205ENST00000522456 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
HOXA3-205ENST00000522456 AHNAK2Q8IVF2 5795 aa7.59□□□□□ -1.19
HOXA3-205ENST00000522456 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
HOXA3-205ENST00000522456 ROMO1P60602 79 aa7.54□□□□□ -1.2
HOXA3-205ENST00000522456 KRTAP4-3Q9BYR4 195 aa7.53□□□□□ -1.2
HOXA3-205ENST00000522456 KRTAP5-4Q6L8H1 288 aa7.45□□□□□ -1.22
HOXA3-205ENST00000522456 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
HOXA3-205ENST00000522456 KRTAP5-10Q6L8G5 202 aa7.42□□□□□ -1.22
HOXA3-205ENST00000522456 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
HOXA3-205ENST00000522456 BRK1Q8WUW1 75 aa7.34□□□□□ -1.23
HOXA3-205ENST00000522456 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
HOXA3-205ENST00000522456 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
HOXA3-205ENST00000522456 KRTAP5-7Q6L8G8 165 aa7.19□□□□□ -1.26
HOXA3-205ENST00000522456 KRTAP5-3Q6L8H2 238 aa7.16□□□□□ -1.26
HOXA3-205ENST00000522456 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.26
HOXA3-205ENST00000522456 KRTAP20-2Q3LI61 65 aa7.07□□□□□ -1.28
HOXA3-205ENST00000522456 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
HOXA3-205ENST00000522456 KRTAP5-5Q701N2 237 aaPredicted RBP7.03□□□□□ -1.28
HOXA3-205ENST00000522456 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
HOXA3-205ENST00000522456 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
HOXA3-205ENST00000522456 PMAIP1Q13794 54 aa6.9□□□□□ -1.3
HOXA3-205ENST00000522456 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
HOXA3-205ENST00000522456 SYNE1Q8NF91 8797 aaKnown RBP6.78□□□□□ -1.32
HOXA3-205ENST00000522456 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
HOXA3-205ENST00000522456 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
HOXA3-205ENST00000522456 MT1AP04731 61 aa6.63□□□□□ -1.35
HOXA3-205ENST00000522456 KRTAP6-1Q3LI64 71 aa6.58□□□□□ -1.36
HOXA3-205ENST00000522456 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
HOXA3-205ENST00000522456 KRTAP5-2Q701N4 177 aa6.47□□□□□ -1.37
HOXA3-205ENST00000522456 KTN1-AS1Q86SY8 53 aa6.4□□□□□ -1.38
HOXA3-205ENST00000522456 KRTAP9-4Q9BYQ2 154 aa6.4□□□□□ -1.38
HOXA3-205ENST00000522456 AHNAKQ09666 5890 aaKnown RBP6.34□□□□□ -1.39
HOXA3-205ENST00000522456 KRTAP5-8O75690 187 aa6.33□□□□□ -1.4
HOXA3-205ENST00000522456 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
HOXA3-205ENST00000522456 MUC5BQ9HC84 5762 aaPredicted RBP6.29□□□□□ -1.4
HOXA3-205ENST00000522456 KRTAP6-2Q3LI66 62 aa6.25□□□□□ -1.41
HOXA3-205ENST00000522456 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
HOXA3-205ENST00000522456 MT3P25713 68 aa6.08□□□□□ -1.44
HOXA3-205ENST00000522456 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
HOXA3-205ENST00000522456 KRTAP9-9Q9BYP9 154 aa6.08□□□□□ -1.44
HOXA3-205ENST00000522456 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
HOXA3-205ENST00000522456 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
HOXA3-205ENST00000522456 LUZP6Q538Z0 58 aa5.41□□□□□ -1.54
HOXA3-205ENST00000522456 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
HOXA3-205ENST00000522456 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
HOXA3-205ENST00000522456 LCE1BQ5T7P3 118 aa5.2□□□□□ -1.58
HOXA3-205ENST00000522456 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
HOXA3-205ENST00000522456 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
HOXA3-205ENST00000522456 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
HOXA3-205ENST00000522456 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
HOXA3-205ENST00000522456 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
HOXA3-205ENST00000522456 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
HOXA3-205ENST00000522456 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
HOXA3-205ENST00000522456 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
HOXA3-205ENST00000522456 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
HOXA3-205ENST00000522456 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
HOXA3-205ENST00000522456 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
HOXA3-205ENST00000522456 INE1O15225 51 aa3.9□□□□□ -1.79
HOXA3-205ENST00000522456 PRM1P04553 51 aa3.87□□□□□ -1.79
HOXA3-205ENST00000522456 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.8
HOXA3-205ENST00000522456 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
HOXA3-205ENST00000522456 H3BS24 57 aa3.19□□□□□ -1.9
HOXA3-205ENST00000522456 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 118.4 ms