RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
SPIDR-218ENST00000522222 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
SPIDR-218ENST00000522222 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
SPIDR-218ENST00000522222 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
SPIDR-218ENST00000522222 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
SPIDR-218ENST00000522222 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
SPIDR-218ENST00000522222 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
SPIDR-218ENST00000522222 TNP1P09430 55 aa2.9□□□□□ -1.95
SPIDR-218ENST00000522222 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
SPIDR-218ENST00000522222 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
SPIDR-218ENST00000522222 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
SPIDR-218ENST00000522222 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
SPIDR-218ENST00000522222 MT1XP80297 61 aa2.85□□□□□ -1.95
SPIDR-218ENST00000522222 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
SPIDR-218ENST00000522222 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
SPIDR-218ENST00000522222 NEBP20929 6669 aa2.81□□□□□ -1.96
SPIDR-218ENST00000522222 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
SPIDR-218ENST00000522222 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
SPIDR-218ENST00000522222 KMT2DO14686 5537 aa2.74□□□□□ -1.97
SPIDR-218ENST00000522222 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
SPIDR-218ENST00000522222 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
SPIDR-218ENST00000522222 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
SPIDR-218ENST00000522222 KRTAP10-12P60413 245 aa2.69□□□□□ -1.98
SPIDR-218ENST00000522222 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
SPIDR-218ENST00000522222 SPRR2EP22531 72 aa2.67□□□□□ -1.98
SPIDR-218ENST00000522222 SPRR2BP35325 72 aa2.67□□□□□ -1.98
SPIDR-218ENST00000522222 SPRR2AP35326 72 aa2.67□□□□□ -1.98
SPIDR-218ENST00000522222 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
SPIDR-218ENST00000522222 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
SPIDR-218ENST00000522222 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
SPIDR-218ENST00000522222 MT3P25713 68 aa2.6□□□□□ -1.99
SPIDR-218ENST00000522222 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
SPIDR-218ENST00000522222 SPRR2DP22532 72 aa2.58□□□□□ -2
SPIDR-218ENST00000522222 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
SPIDR-218ENST00000522222 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
SPIDR-218ENST00000522222 KRTAP12-3P60328 96 aa2.56□□□□□ -2
SPIDR-218ENST00000522222 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
SPIDR-218ENST00000522222 INE1O15225 51 aa2.52□□□□□ -2.01
SPIDR-218ENST00000522222 MT1EP04732 61 aa2.52□□□□□ -2.01
SPIDR-218ENST00000522222 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
SPIDR-218ENST00000522222 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
SPIDR-218ENST00000522222 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
SPIDR-218ENST00000522222 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
SPIDR-218ENST00000522222 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
SPIDR-218ENST00000522222 MT1LQ93083 61 aa2.42□□□□□ -2.02
SPIDR-218ENST00000522222 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
SPIDR-218ENST00000522222 MT1GP13640 62 aa2.4□□□□□ -2.03
SPIDR-218ENST00000522222 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
SPIDR-218ENST00000522222 MT1MQ8N339 61 aa2.39□□□□□ -2.03
SPIDR-218ENST00000522222 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
SPIDR-218ENST00000522222 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
SPIDR-218ENST00000522222 MT4P47944 62 aa2.24□□□□□ -2.05
SPIDR-218ENST00000522222 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
SPIDR-218ENST00000522222 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
SPIDR-218ENST00000522222 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
SPIDR-218ENST00000522222 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SPIDR-218ENST00000522222 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
SPIDR-218ENST00000522222 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
SPIDR-218ENST00000522222 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
SPIDR-218ENST00000522222 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SPIDR-218ENST00000522222 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
SPIDR-218ENST00000522222 MT1AP04731 61 aa2.06□□□□□ -2.08
SPIDR-218ENST00000522222 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
SPIDR-218ENST00000522222 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
SPIDR-218ENST00000522222 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
SPIDR-218ENST00000522222 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
SPIDR-218ENST00000522222 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
SPIDR-218ENST00000522222 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
SPIDR-218ENST00000522222 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
SPIDR-218ENST00000522222 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
SPIDR-218ENST00000522222 PRM1P04553 51 aa1.72□□□□□ -2.13
SPIDR-218ENST00000522222 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
SPIDR-218ENST00000522222 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
SPIDR-218ENST00000522222 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
SPIDR-218ENST00000522222 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SPIDR-218ENST00000522222 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SPIDR-218ENST00000522222 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SPIDR-218ENST00000522222 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms