RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 KRTAP19-8Q3LI54 63 aa2.15□□□□□ -2.07
CTNNA1-232ENST00000522013 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
CTNNA1-232ENST00000522013 C20orf197Q8N268 126 aa2.14□□□□□ -2.07
CTNNA1-232ENST00000522013 DMAC1Q96GE9 116 aa2.14□□□□□ -2.07
CTNNA1-232ENST00000522013 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
CTNNA1-232ENST00000522013 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
CTNNA1-232ENST00000522013 TMEM258P61165 79 aa2.12□□□□□ -2.07
CTNNA1-232ENST00000522013 NDUFC1O43677 76 aa2.11□□□□□ -2.07
CTNNA1-232ENST00000522013 COX7CP15954 63 aa2.11□□□□□ -2.07
CTNNA1-232ENST00000522013 P0C880 135 aa2.1□□□□□ -2.07
CTNNA1-232ENST00000522013 MT4P47944 62 aa2.1□□□□□ -2.07
CTNNA1-232ENST00000522013 LINC01554Q52M75 96 aa2.1□□□□□ -2.07
CTNNA1-232ENST00000522013 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
CTNNA1-232ENST00000522013 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
CTNNA1-232ENST00000522013 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
CTNNA1-232ENST00000522013 ACYP2P14621 99 aa2.09□□□□□ -2.07
CTNNA1-232ENST00000522013 H0YAA0 97 aa2.08□□□□□ -2.08
CTNNA1-232ENST00000522013 CYSTM1Q9H1C7 97 aa2.08□□□□□ -2.08
CTNNA1-232ENST00000522013 PRO2289Q9P1D8 64 aa2.07□□□□□ -2.08
CTNNA1-232ENST00000522013 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
CTNNA1-232ENST00000522013 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
CTNNA1-232ENST00000522013 CCDC179H3BU77 68 aa2.06□□□□□ -2.08
CTNNA1-232ENST00000522013 H7BZZ5 65 aa2.06□□□□□ -2.08
CTNNA1-232ENST00000522013 CRIPTQ9P021 101 aa2.05□□□□□ -2.08
CTNNA1-232ENST00000522013 COA5Q86WW8 74 aa2.04□□□□□ -2.08
CTNNA1-232ENST00000522013 SPTSSBQ8NFR3 76 aa2.04□□□□□ -2.08
CTNNA1-232ENST00000522013 LCE3AQ5TA76 89 aa2.02□□□□□ -2.09
CTNNA1-232ENST00000522013 MT1XP80297 61 aa2.01□□□□□ -2.09
CTNNA1-232ENST00000522013 M0QZ58 72 aa2□□□□□ -2.09
CTNNA1-232ENST00000522013 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
CTNNA1-232ENST00000522013 ATP5EP56381 51 aaPredicted RBP1.97□□□□□ -2.09
CTNNA1-232ENST00000522013 RPS28P62857 69 aaKnown RBP1.97□□□□□ -2.09
CTNNA1-232ENST00000522013 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
CTNNA1-232ENST00000522013 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
CTNNA1-232ENST00000522013 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
CTNNA1-232ENST00000522013 SERP1Q9Y6X1 66 aa1.94□□□□□ -2.1
CTNNA1-232ENST00000522013 Q1T7F1 81 aa1.93□□□□□ -2.1
CTNNA1-232ENST00000522013 A0A1B0GU69 56 aa1.92□□□□□ -2.1
CTNNA1-232ENST00000522013 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
CTNNA1-232ENST00000522013 SPATA8Q6RVD6 105 aa1.91□□□□□ -2.1
CTNNA1-232ENST00000522013 A0A0D9SG42 100 aa1.9□□□□□ -2.11
CTNNA1-232ENST00000522013 LINC01558Q9Y6Z2 57 aa1.9□□□□□ -2.11
CTNNA1-232ENST00000522013 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
CTNNA1-232ENST00000522013 PRR15LQ9BU68 103 aa1.88□□□□□ -2.11
CTNNA1-232ENST00000522013 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CTNNA1-232ENST00000522013 ROMO1P60602 79 aa1.87□□□□□ -2.11
CTNNA1-232ENST00000522013 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
CTNNA1-232ENST00000522013 BRK1Q8WUW1 75 aa1.84□□□□□ -2.11
CTNNA1-232ENST00000522013 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
CTNNA1-232ENST00000522013 UQCR11O14957 56 aa1.82□□□□□ -2.12
CTNNA1-232ENST00000522013 KRTAP20-2Q3LI61 65 aa1.82□□□□□ -2.12
CTNNA1-232ENST00000522013 MT1EP04732 61 aa1.8□□□□□ -2.12
CTNNA1-232ENST00000522013 MIR22HGQ0VDD5 57 aa1.8□□□□□ -2.12
CTNNA1-232ENST00000522013 KRTAP19-7Q3SYF9 63 aa1.78□□□□□ -2.12
CTNNA1-232ENST00000522013 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
CTNNA1-232ENST00000522013 LCE1BQ5T7P3 118 aa1.78□□□□□ -2.12
CTNNA1-232ENST00000522013 C10orf95Q9H7T3 257 aa1.78□□□□□ -2.12
CTNNA1-232ENST00000522013 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CTNNA1-232ENST00000522013 MT1GP13640 62 aa1.77□□□□□ -2.13
CTNNA1-232ENST00000522013 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
CTNNA1-232ENST00000522013 MT1MQ8N339 61 aa1.75□□□□□ -2.13
CTNNA1-232ENST00000522013 TNP1P09430 55 aa1.73□□□□□ -2.13
CTNNA1-232ENST00000522013 CDC42SE1Q9NRR8 79 aa1.73□□□□□ -2.13
CTNNA1-232ENST00000522013 KRTAP12-3P60328 96 aa1.71□□□□□ -2.14
CTNNA1-232ENST00000522013 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
CTNNA1-232ENST00000522013 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
CTNNA1-232ENST00000522013 INE1O15225 51 aa1.69□□□□□ -2.14
CTNNA1-232ENST00000522013 MT1LQ93083 61 aa1.66□□□□□ -2.14
CTNNA1-232ENST00000522013 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
CTNNA1-232ENST00000522013 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
CTNNA1-232ENST00000522013 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
CTNNA1-232ENST00000522013 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
CTNNA1-232ENST00000522013 MT1AP04731 61 aa1.4□□□□□ -2.19
CTNNA1-232ENST00000522013 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CTNNA1-232ENST00000522013 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
CTNNA1-232ENST00000522013 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
CTNNA1-232ENST00000522013 PRM1P04553 51 aa0.85□□□□□ -2.27
CTNNA1-232ENST00000522013 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 127.7 ms