RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 KRTAP12-3P60328 96 aa8.8□□□□□ -1
PVT1-212ENST00000521951 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
PVT1-212ENST00000521951 NEBP20929 6669 aa8.76□□□□□ -1.01
PVT1-212ENST00000521951 KRTAP19-3Q7Z4W3 81 aa8.67□□□□□ -1.02
PVT1-212ENST00000521951 MT1LQ93083 61 aa8.64□□□□□ -1.03
PVT1-212ENST00000521951 LCE5AQ5TCM9 118 aa8.6□□□□□ -1.03
PVT1-212ENST00000521951 MT1GP13640 62 aa8.55□□□□□ -1.04
PVT1-212ENST00000521951 SPRR2DP22532 72 aa8.54□□□□□ -1.04
PVT1-212ENST00000521951 KRTAP4-12Q9BQ66 201 aa8.51□□□□□ -1.05
PVT1-212ENST00000521951 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
PVT1-212ENST00000521951 MT1MQ8N339 61 aa8.43□□□□□ -1.06
PVT1-212ENST00000521951 PRAC1Q96KF2 57 aa8.42□□□□□ -1.06
PVT1-212ENST00000521951 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
PVT1-212ENST00000521951 KRTAP20-1Q3LI63 56 aa8.34□□□□□ -1.07
PVT1-212ENST00000521951 KRTAP2-3P0C7H8 128 aa8.33□□□□□ -1.08
PVT1-212ENST00000521951 KRTAP2-4Q9BYR9 128 aa8.33□□□□□ -1.08
PVT1-212ENST00000521951 KTN1-AS1Q86SY8 53 aa8.32□□□□□ -1.08
PVT1-212ENST00000521951 KRTAP19-4Q3LI73 84 aa8.3□□□□□ -1.08
PVT1-212ENST00000521951 KRTAP4-7Q9BYR0 210 aa8.29□□□□□ -1.08
PVT1-212ENST00000521951 KRTAP9-9Q9BYP9 154 aa8.27□□□□□ -1.09
PVT1-212ENST00000521951 KRTAP9-4Q9BYQ2 154 aa8.27□□□□□ -1.09
PVT1-212ENST00000521951 KRTAP4-3Q9BYR4 195 aa8.24□□□□□ -1.09
PVT1-212ENST00000521951 LCE3CQ5T5A8 94 aa8.18□□□□□ -1.1
PVT1-212ENST00000521951 DSTQ03001 7570 aaKnown RBP8.13□□□□□ -1.11
PVT1-212ENST00000521951 KRTAP2-2Q9BYT5 123 aa8.11□□□□□ -1.11
PVT1-212ENST00000521951 KRTAP2-1Q9BYU5 128 aa8.11□□□□□ -1.11
PVT1-212ENST00000521951 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
PVT1-212ENST00000521951 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
PVT1-212ENST00000521951 KRTAP9-6A8MVA2 160 aa7.73□□□□□ -1.17
PVT1-212ENST00000521951 LCE4AQ5TA78 99 aa7.71□□□□□ -1.18
PVT1-212ENST00000521951 KRTAP5-5Q701N2 237 aaPredicted RBP7.65□□□□□ -1.18
PVT1-212ENST00000521951 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
PVT1-212ENST00000521951 KRTAP5-4Q6L8H1 288 aa7.6□□□□□ -1.19
PVT1-212ENST00000521951 H3BS24 57 aa7.54□□□□□ -1.2
PVT1-212ENST00000521951 SPRR5A0A1B0GTR4 108 aa7.53□□□□□ -1.2
PVT1-212ENST00000521951 KRTAP4-2Q9BYR5 136 aa7.49□□□□□ -1.21
PVT1-212ENST00000521951 MT4P47944 62 aa7.42□□□□□ -1.22
PVT1-212ENST00000521951 KRTAP4-11Q9BYQ6 195 aa7.39□□□□□ -1.23
PVT1-212ENST00000521951 MT1AP04731 61 aa7.35□□□□□ -1.23
PVT1-212ENST00000521951 KRTAP6-1Q3LI64 71 aa7.28□□□□□ -1.24
PVT1-212ENST00000521951 KRTAP12-4P60329 112 aa7.26□□□□□ -1.25
PVT1-212ENST00000521951 SYNE1Q8NF91 8797 aaKnown RBP7.25□□□□□ -1.25
PVT1-212ENST00000521951 HMCN1Q96RW7 5635 aa7.23□□□□□ -1.25
PVT1-212ENST00000521951 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
PVT1-212ENST00000521951 LUZP6Q538Z0 58 aa6.94□□□□□ -1.3
PVT1-212ENST00000521951 KRTAP5-3Q6L8H2 238 aa6.9□□□□□ -1.31
PVT1-212ENST00000521951 KRTAP6-2Q3LI66 62 aa6.81□□□□□ -1.32
PVT1-212ENST00000521951 KRTAP5-2Q701N4 177 aa6.79□□□□□ -1.32
PVT1-212ENST00000521951 AHNAK2Q8IVF2 5795 aa6.7□□□□□ -1.34
PVT1-212ENST00000521951 MT3P25713 68 aa6.69□□□□□ -1.34
PVT1-212ENST00000521951 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
PVT1-212ENST00000521951 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
PVT1-212ENST00000521951 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
PVT1-212ENST00000521951 OBSCNQ5VST9 7968 aa6.21□□□□□ -1.42
PVT1-212ENST00000521951 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
PVT1-212ENST00000521951 KRTAP5-8O75690 187 aa6.1□□□□□ -1.43
PVT1-212ENST00000521951 LCE3DQ9BYE3 92 aa6.04□□□□□ -1.44
PVT1-212ENST00000521951 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
PVT1-212ENST00000521951 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
PVT1-212ENST00000521951 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
PVT1-212ENST00000521951 MUC5ACP98088 5654 aa5.76□□□□□ -1.49
PVT1-212ENST00000521951 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
PVT1-212ENST00000521951 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
PVT1-212ENST00000521951 MUC5BQ9HC84 5762 aaPredicted RBP5.4□□□□□ -1.54
PVT1-212ENST00000521951 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
PVT1-212ENST00000521951 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
PVT1-212ENST00000521951 INE1O15225 51 aa5.2□□□□□ -1.58
PVT1-212ENST00000521951 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.13□□□□□ -1.59
PVT1-212ENST00000521951 KRTAP5-11Q6L8G4 156 aa5□□□□□ -1.61
PVT1-212ENST00000521951 KRTAP21-2Q3LI59 83 aa4.79□□□□□ -1.64
PVT1-212ENST00000521951 PRM1P04553 51 aa4.77□□□□□ -1.65
PVT1-212ENST00000521951 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
PVT1-212ENST00000521951 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
PVT1-212ENST00000521951 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
PVT1-212ENST00000521951 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
PVT1-212ENST00000521951 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
PVT1-212ENST00000521951 MUC16Q8WXI7 14507 aa2.68□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 73.8 ms