RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MT1LQ93083 61 aa6.54□□□□□ -1.36
TRAPPC9-210ENST00000521667 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
TRAPPC9-210ENST00000521667 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
TRAPPC9-210ENST00000521667 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
TRAPPC9-210ENST00000521667 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.39
TRAPPC9-210ENST00000521667 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC9-210ENST00000521667 KRTAP19-3Q7Z4W3 81 aa6.31□□□□□ -1.4
TRAPPC9-210ENST00000521667 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
TRAPPC9-210ENST00000521667 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
TRAPPC9-210ENST00000521667 MT1GP13640 62 aa6.26□□□□□ -1.41
TRAPPC9-210ENST00000521667 MT1MQ8N339 61 aa6.22□□□□□ -1.41
TRAPPC9-210ENST00000521667 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
TRAPPC9-210ENST00000521667 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
TRAPPC9-210ENST00000521667 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
TRAPPC9-210ENST00000521667 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
TRAPPC9-210ENST00000521667 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
TRAPPC9-210ENST00000521667 SPRR2EP22531 72 aa6.07□□□□□ -1.44
TRAPPC9-210ENST00000521667 SPRR2BP35325 72 aa6.07□□□□□ -1.44
TRAPPC9-210ENST00000521667 SPRR2AP35326 72 aa6.07□□□□□ -1.44
TRAPPC9-210ENST00000521667 INE1O15225 51 aa6.06□□□□□ -1.44
TRAPPC9-210ENST00000521667 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
TRAPPC9-210ENST00000521667 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
TRAPPC9-210ENST00000521667 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
TRAPPC9-210ENST00000521667 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
TRAPPC9-210ENST00000521667 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
TRAPPC9-210ENST00000521667 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
TRAPPC9-210ENST00000521667 NEBP20929 6669 aa5.84□□□□□ -1.47
TRAPPC9-210ENST00000521667 SPRR2DP22532 72 aa5.84□□□□□ -1.48
TRAPPC9-210ENST00000521667 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
TRAPPC9-210ENST00000521667 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC9-210ENST00000521667 MT1AP04731 61 aa5.53□□□□□ -1.52
TRAPPC9-210ENST00000521667 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
TRAPPC9-210ENST00000521667 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
TRAPPC9-210ENST00000521667 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
TRAPPC9-210ENST00000521667 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
TRAPPC9-210ENST00000521667 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
TRAPPC9-210ENST00000521667 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
TRAPPC9-210ENST00000521667 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
TRAPPC9-210ENST00000521667 MT4P47944 62 aa5.13□□□□□ -1.59
TRAPPC9-210ENST00000521667 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
TRAPPC9-210ENST00000521667 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
TRAPPC9-210ENST00000521667 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
TRAPPC9-210ENST00000521667 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
TRAPPC9-210ENST00000521667 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
TRAPPC9-210ENST00000521667 MT3P25713 68 aa5.01□□□□□ -1.61
TRAPPC9-210ENST00000521667 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TRAPPC9-210ENST00000521667 HMCN1Q96RW7 5635 aa4.98□□□□□ -1.61
TRAPPC9-210ENST00000521667 KRTAP20-2Q3LI61 65 aa4.92□□□□□ -1.62
TRAPPC9-210ENST00000521667 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.62
TRAPPC9-210ENST00000521667 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
TRAPPC9-210ENST00000521667 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
TRAPPC9-210ENST00000521667 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
TRAPPC9-210ENST00000521667 PRM1P04553 51 aa4.42□□□□□ -1.7
TRAPPC9-210ENST00000521667 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
TRAPPC9-210ENST00000521667 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
TRAPPC9-210ENST00000521667 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
TRAPPC9-210ENST00000521667 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
TRAPPC9-210ENST00000521667 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
TRAPPC9-210ENST00000521667 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
TRAPPC9-210ENST00000521667 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
TRAPPC9-210ENST00000521667 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
TRAPPC9-210ENST00000521667 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
TRAPPC9-210ENST00000521667 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
TRAPPC9-210ENST00000521667 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
TRAPPC9-210ENST00000521667 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
TRAPPC9-210ENST00000521667 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
TRAPPC9-210ENST00000521667 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
TRAPPC9-210ENST00000521667 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
TRAPPC9-210ENST00000521667 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
TRAPPC9-210ENST00000521667 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
TRAPPC9-210ENST00000521667 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
TRAPPC9-210ENST00000521667 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
TRAPPC9-210ENST00000521667 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
TRAPPC9-210ENST00000521667 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
TRAPPC9-210ENST00000521667 PHGR1C9JFL3 82 aa3□□□□□ -1.93
TRAPPC9-210ENST00000521667 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
TRAPPC9-210ENST00000521667 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
TRAPPC9-210ENST00000521667 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 133.4 ms