RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
PRKDC-204ENST00000521331 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
PRKDC-204ENST00000521331 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-204ENST00000521331 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
PRKDC-204ENST00000521331 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
PRKDC-204ENST00000521331 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
PRKDC-204ENST00000521331 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
PRKDC-204ENST00000521331 A0A1B0GU33 70 aa5.77□□□□□ -1.49
PRKDC-204ENST00000521331 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
PRKDC-204ENST00000521331 GPR98Q8WXG9 6306 aa5.72□□□□□ -1.49
PRKDC-204ENST00000521331 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
PRKDC-204ENST00000521331 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
PRKDC-204ENST00000521331 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
PRKDC-204ENST00000521331 K7ERS5 55 aa5.6□□□□□ -1.51
PRKDC-204ENST00000521331 KRTAP19-7Q3SYF9 63 aa5.59□□□□□ -1.51
PRKDC-204ENST00000521331 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
PRKDC-204ENST00000521331 MT1EP04732 61 aa5.57□□□□□ -1.52
PRKDC-204ENST00000521331 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
PRKDC-204ENST00000521331 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
PRKDC-204ENST00000521331 ROMO1P60602 79 aa5.52□□□□□ -1.53
PRKDC-204ENST00000521331 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
PRKDC-204ENST00000521331 MT1GP13640 62 aa5.43□□□□□ -1.54
PRKDC-204ENST00000521331 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
PRKDC-204ENST00000521331 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
PRKDC-204ENST00000521331 A0A0D9SG42 100 aa5.38□□□□□ -1.55
PRKDC-204ENST00000521331 MT4P47944 62 aa5.38□□□□□ -1.55
PRKDC-204ENST00000521331 KRTAP19-5Q3LI72 72 aa5.37□□□□□ -1.55
PRKDC-204ENST00000521331 KRTAP12-1P59990 96 aa5.34□□□□□ -1.55
PRKDC-204ENST00000521331 MT1MQ8N339 61 aa5.31□□□□□ -1.56
PRKDC-204ENST00000521331 MT1LQ93083 61 aa5.27□□□□□ -1.57
PRKDC-204ENST00000521331 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
PRKDC-204ENST00000521331 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
PRKDC-204ENST00000521331 KRTAP5-10Q6L8G5 202 aa5.25□□□□□ -1.57
PRKDC-204ENST00000521331 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
PRKDC-204ENST00000521331 KRTAP4-3Q9BYR4 195 aa5.18□□□□□ -1.58
PRKDC-204ENST00000521331 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
PRKDC-204ENST00000521331 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
PRKDC-204ENST00000521331 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
PRKDC-204ENST00000521331 TNP1P09430 55 aa5.06□□□□□ -1.6
PRKDC-204ENST00000521331 KRTAP5-3Q6L8H2 238 aa5.06□□□□□ -1.6
PRKDC-204ENST00000521331 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
PRKDC-204ENST00000521331 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
PRKDC-204ENST00000521331 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
PRKDC-204ENST00000521331 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
PRKDC-204ENST00000521331 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
PRKDC-204ENST00000521331 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
PRKDC-204ENST00000521331 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
PRKDC-204ENST00000521331 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
PRKDC-204ENST00000521331 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
PRKDC-204ENST00000521331 KRTAP5-2Q701N4 177 aa4.55□□□□□ -1.68
PRKDC-204ENST00000521331 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
PRKDC-204ENST00000521331 MT1AP04731 61 aa4.48□□□□□ -1.69
PRKDC-204ENST00000521331 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
PRKDC-204ENST00000521331 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
PRKDC-204ENST00000521331 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-204ENST00000521331 MUC5ACP98088 5654 aa4.42□□□□□ -1.7
PRKDC-204ENST00000521331 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
PRKDC-204ENST00000521331 MT3P25713 68 aa4.38□□□□□ -1.71
PRKDC-204ENST00000521331 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
PRKDC-204ENST00000521331 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
PRKDC-204ENST00000521331 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
PRKDC-204ENST00000521331 INE1O15225 51 aa4.18□□□□□ -1.74
PRKDC-204ENST00000521331 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
PRKDC-204ENST00000521331 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
PRKDC-204ENST00000521331 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
PRKDC-204ENST00000521331 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
PRKDC-204ENST00000521331 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-204ENST00000521331 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
PRKDC-204ENST00000521331 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
PRKDC-204ENST00000521331 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
PRKDC-204ENST00000521331 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
PRKDC-204ENST00000521331 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
PRKDC-204ENST00000521331 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
PRKDC-204ENST00000521331 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
PRKDC-204ENST00000521331 PRM1P04553 51 aa2.89□□□□□ -1.95
PRKDC-204ENST00000521331 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
PRKDC-204ENST00000521331 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
PRKDC-204ENST00000521331 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 75.5 ms