RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 J3QR89 54 aa3.27□□□□□ -1.89
CDH17-204ENST00000520952 MT1MQ8N339 61 aa3.26□□□□□ -1.89
CDH17-204ENST00000520952 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
CDH17-204ENST00000520952 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
CDH17-204ENST00000520952 SPATA8Q6RVD6 105 aa3.23□□□□□ -1.89
CDH17-204ENST00000520952 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
CDH17-204ENST00000520952 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
CDH17-204ENST00000520952 SMIM20Q8N5G0 67 aa3.23□□□□□ -1.89
CDH17-204ENST00000520952 MT1LQ93083 61 aa3.23□□□□□ -1.89
CDH17-204ENST00000520952 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
CDH17-204ENST00000520952 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
CDH17-204ENST00000520952 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
CDH17-204ENST00000520952 SPANXA2-OT1Q8N9U9 137 aa3.2□□□□□ -1.9
CDH17-204ENST00000520952 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
CDH17-204ENST00000520952 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
CDH17-204ENST00000520952 COA5Q86WW8 74 aa3.16□□□□□ -1.9
CDH17-204ENST00000520952 SERP1Q9Y6X1 66 aa3.16□□□□□ -1.9
CDH17-204ENST00000520952 A0A1B0GU33 70 aa3.15□□□□□ -1.91
CDH17-204ENST00000520952 LCE3AQ5TA76 89 aa3.14□□□□□ -1.91
CDH17-204ENST00000520952 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
CDH17-204ENST00000520952 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
CDH17-204ENST00000520952 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
CDH17-204ENST00000520952 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
CDH17-204ENST00000520952 A8MU10 97 aa3.08□□□□□ -1.92
CDH17-204ENST00000520952 ANAPC13Q9BS18 74 aa3.08□□□□□ -1.92
CDH17-204ENST00000520952 K7ERU9 68 aa3.07□□□□□ -1.92
CDH17-204ENST00000520952 TNP1P09430 55 aa3.05□□□□□ -1.92
CDH17-204ENST00000520952 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
CDH17-204ENST00000520952 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
CDH17-204ENST00000520952 KRTAP12-3P60328 96 aa3□□□□□ -1.93
CDH17-204ENST00000520952 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
CDH17-204ENST00000520952 A0A1B0GU69 56 aa2.99□□□□□ -1.93
CDH17-204ENST00000520952 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
CDH17-204ENST00000520952 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
CDH17-204ENST00000520952 H7BZZ5 65 aa2.96□□□□□ -1.94
CDH17-204ENST00000520952 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
CDH17-204ENST00000520952 COX7CP15954 63 aa2.94□□□□□ -1.94
CDH17-204ENST00000520952 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
CDH17-204ENST00000520952 K7ERS5 55 aa2.91□□□□□ -1.94
CDH17-204ENST00000520952 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CDH17-204ENST00000520952 A6NED7 52 aa2.86□□□□□ -1.95
CDH17-204ENST00000520952 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
CDH17-204ENST00000520952 PRR15LQ9BU68 103 aa2.8□□□□□ -1.96
CDH17-204ENST00000520952 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CDH17-204ENST00000520952 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
CDH17-204ENST00000520952 LINC01558Q9Y6Z2 57 aa2.78□□□□□ -1.96
CDH17-204ENST00000520952 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
CDH17-204ENST00000520952 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
CDH17-204ENST00000520952 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
CDH17-204ENST00000520952 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
CDH17-204ENST00000520952 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
CDH17-204ENST00000520952 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
CDH17-204ENST00000520952 CCDC179H3BU77 68 aa2.74□□□□□ -1.97
CDH17-204ENST00000520952 UQCR11O14957 56 aa2.73□□□□□ -1.97
CDH17-204ENST00000520952 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
CDH17-204ENST00000520952 RPS28P62857 69 aaKnown RBP2.73□□□□□ -1.97
CDH17-204ENST00000520952 MT1AP04731 61 aa2.72□□□□□ -1.97
CDH17-204ENST00000520952 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CDH17-204ENST00000520952 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
CDH17-204ENST00000520952 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
CDH17-204ENST00000520952 ATP5EP56381 51 aaPredicted RBP2.66□□□□□ -1.98
CDH17-204ENST00000520952 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
CDH17-204ENST00000520952 TMEM258P61165 79 aa2.56□□□□□ -2
CDH17-204ENST00000520952 KTN1-AS1Q86SY8 53 aa2.52□□□□□ -2.01
CDH17-204ENST00000520952 Q1T7F1 81 aa2.49□□□□□ -2.01
CDH17-204ENST00000520952 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
CDH17-204ENST00000520952 ROMO1P60602 79 aa2.44□□□□□ -2.02
CDH17-204ENST00000520952 BRK1Q8WUW1 75 aa2.35□□□□□ -2.03
CDH17-204ENST00000520952 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CDH17-204ENST00000520952 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
CDH17-204ENST00000520952 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
CDH17-204ENST00000520952 INE1O15225 51 aa1.92□□□□□ -2.1
CDH17-204ENST00000520952 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CDH17-204ENST00000520952 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
CDH17-204ENST00000520952 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CDH17-204ENST00000520952 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
CDH17-204ENST00000520952 PRM1P04553 51 aa1.26□□□□□ -2.21
CDH17-204ENST00000520952 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 55.5 ms