RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 SNHG12Q9BXW3 62 aa0.83□□□□□ -2.28
LINC00535-204ENST00000520513 LEPROTL1O95214 131 aa0.82□□□□□ -2.28
LINC00535-204ENST00000520513 CCKP06307 115 aa0.81□□□□□ -2.28
LINC00535-204ENST00000520513 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
LINC00535-204ENST00000520513 MT1AP04731 61 aa0.8□□□□□ -2.28
LINC00535-204ENST00000520513 BVES-AS1Q5T3Y7 98 aa0.8□□□□□ -2.28
LINC00535-204ENST00000520513 TMEM218A2RU14 115 aa0.79□□□□□ -2.28
LINC00535-204ENST00000520513 SYS1-DBNDD2H3BUS1 97 aa0.79□□□□□ -2.28
LINC00535-204ENST00000520513 SCGB1A1P11684 91 aa0.79□□□□□ -2.28
LINC00535-204ENST00000520513 LINC00208Q96KT6 92 aa0.79□□□□□ -2.28
LINC00535-204ENST00000520513 LOC101927531A0A1B0GV80 90 aa0.78□□□□□ -2.28
LINC00535-204ENST00000520513 C9JAW5 83 aa0.78□□□□□ -2.28
LINC00535-204ENST00000520513 M0QZ58 72 aa0.78□□□□□ -2.28
LINC00535-204ENST00000520513 COPS9Q8WXC6 57 aa0.78□□□□□ -2.28
LINC00535-204ENST00000520513 H0YGX0 51 aa0.76□□□□□ -2.29
LINC00535-204ENST00000520513 S100PP25815 95 aa0.76□□□□□ -2.29
LINC00535-204ENST00000520513 C12orf57Q99622 126 aa0.76□□□□□ -2.29
LINC00535-204ENST00000520513 VPS25Q9BRG1 176 aa0.76□□□□□ -2.29
LINC00535-204ENST00000520513 HCG22E2RYF7 251 aa0.75□□□□□ -2.29
LINC00535-204ENST00000520513 NDUFB1O75438 58 aa0.75□□□□□ -2.29
LINC00535-204ENST00000520513 CLLU1Q5K131 121 aa0.74□□□□□ -2.29
LINC00535-204ENST00000520513 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
LINC00535-204ENST00000520513 NDUFC1O43677 76 aa0.72□□□□□ -2.29
LINC00535-204ENST00000520513 CYP4F30PQ9H0H9 118 aa0.72□□□□□ -2.29
LINC00535-204ENST00000520513 K7EP34 96 aa0.7□□□□□ -2.3
LINC00535-204ENST00000520513 C20orf197Q8N268 126 aa0.69□□□□□ -2.3
LINC00535-204ENST00000520513 DLEU1O43261 78 aa0.67□□□□□ -2.3
LINC00535-204ENST00000520513 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LINC00535-204ENST00000520513 HIGD1BQ9P298 99 aa0.66□□□□□ -2.3
LINC00535-204ENST00000520513 PRO1854Q9UHT4 67 aa0.66□□□□□ -2.3
LINC00535-204ENST00000520513 SNCGO76070 127 aa0.65□□□□□ -2.31
LINC00535-204ENST00000520513 COX8AP10176 69 aa0.65□□□□□ -2.31
LINC00535-204ENST00000520513 NREPQ16612 68 aa0.65□□□□□ -2.31
LINC00535-204ENST00000520513 SVBPQ8N300 66 aa0.65□□□□□ -2.31
LINC00535-204ENST00000520513 KRTDAPP60985 99 aa0.64□□□□□ -2.31
LINC00535-204ENST00000520513 CCDC179H3BU77 68 aa0.63□□□□□ -2.31
LINC00535-204ENST00000520513 APOC3P02656 99 aa0.63□□□□□ -2.31
LINC00535-204ENST00000520513 TP53AIP1Q9HCN2 124 aa0.63□□□□□ -2.31
LINC00535-204ENST00000520513 TRAV22A0A0B4J277 110 aa0.62□□□□□ -2.31
LINC00535-204ENST00000520513 MT-ATP8P03928 68 aa0.6□□□□□ -2.31
LINC00535-204ENST00000520513 ACYP1P07311 99 aa0.6□□□□□ -2.31
LINC00535-204ENST00000520513 J3QR89 54 aa0.58□□□□□ -2.32
LINC00535-204ENST00000520513 C14orf144Q96I85 54 aa0.57□□□□□ -2.32
LINC00535-204ENST00000520513 COX6CP09669 75 aa0.55□□□□□ -2.32
LINC00535-204ENST00000520513 TNP1P09430 55 aa0.54□□□□□ -2.32
LINC00535-204ENST00000520513 HSD52Q0P140 79 aa0.54□□□□□ -2.32
LINC00535-204ENST00000520513 LOC105371267A0A1B0GV96 52 aa0.53□□□□□ -2.32
LINC00535-204ENST00000520513 H0Y9P7 68 aa0.53□□□□□ -2.32
LINC00535-204ENST00000520513 ATXN8Q156A1 80 aa0.53□□□□□ -2.32
LINC00535-204ENST00000520513 SPCS1Q9Y6A9 102 aa0.53□□□□□ -2.32
LINC00535-204ENST00000520513 ATOX1O00244 68 aa0.52□□□□□ -2.33
LINC00535-204ENST00000520513 VAMP8Q9BV40 100 aa0.52□□□□□ -2.33
LINC00535-204ENST00000520513 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
LINC00535-204ENST00000520513 K7ERU9 68 aa0.48□□□□□ -2.33
LINC00535-204ENST00000520513 UBL5Q9BZL1 73 aa0.47□□□□□ -2.33
LINC00535-204ENST00000520513 PYY3Q5JQD4 70 aa0.44□□□□□ -2.34
LINC00535-204ENST00000520513 ACYP2P14621 99 aa0.41□□□□□ -2.34
LINC00535-204ENST00000520513 UQCR10Q9UDW1 63 aa0.41□□□□□ -2.34
LINC00535-204ENST00000520513 SPTSSBQ8NFR3 76 aa0.4□□□□□ -2.35
LINC00535-204ENST00000520513 ATP5EP2Q5VTU8 51 aa0.38□□□□□ -2.35
LINC00535-204ENST00000520513 M0R143 59 aa0.35□□□□□ -2.35
LINC00535-204ENST00000520513 CHKB-CPT1BH3BT56 60 aa0.33□□□□□ -2.36
LINC00535-204ENST00000520513 S100A1P23297 94 aa0.32□□□□□ -2.36
LINC00535-204ENST00000520513 ETDBQ3ZM63 59 aa0.31□□□□□ -2.36
LINC00535-204ENST00000520513 LINC00643Q86TS7 51 aa0.28□□□□□ -2.36
LINC00535-204ENST00000520513 SERP1Q9Y6X1 66 aa0.28□□□□□ -2.36
LINC00535-204ENST00000520513 H7BZZ5 65 aa0.27□□□□□ -2.37
LINC00535-204ENST00000520513 SMIM6P0DI80 62 aa0.26□□□□□ -2.37
LINC00535-204ENST00000520513 SERP2Q8N6R1 65 aa0.22□□□□□ -2.37
LINC00535-204ENST00000520513 A0A1B0GU69 56 aa0.21□□□□□ -2.38
LINC00535-204ENST00000520513 COL5A1-AS1Q5SY13 56 aa0.16□□□□□ -2.38
LINC00535-204ENST00000520513 GTF2H5Q6ZYL4 71 aa0.16□□□□□ -2.38
LINC00535-204ENST00000520513 LINC01558Q9Y6Z2 57 aa0.15□□□□□ -2.39
LINC00535-204ENST00000520513 UQCR11O14957 56 aa0.12□□□□□ -2.39
LINC00535-204ENST00000520513 PRM1P04553 51 aa0.04□□□□□ -2.4
LINC00535-204ENST00000520513 A0A1B0GV90 55 aa-0.04□□□□□ -2.42
LINC00535-204ENST00000520513 ATP5EP56381 51 aaPredicted RBP-0.06□□□□□ -2.42
Retrieved 77 of 20,778 RNA–protein pairs in 3348 ms