RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
SNHG6-201ENST00000520348 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
SNHG6-201ENST00000520348 H3BS24 57 aa6□□□□□ -1.45
SNHG6-201ENST00000520348 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
SNHG6-201ENST00000520348 KMT2DO14686 5537 aa5.99□□□□□ -1.45
SNHG6-201ENST00000520348 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
SNHG6-201ENST00000520348 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
SNHG6-201ENST00000520348 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
SNHG6-201ENST00000520348 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
SNHG6-201ENST00000520348 MT1EP04732 61 aa5.86□□□□□ -1.47
SNHG6-201ENST00000520348 MT1LQ93083 61 aa5.74□□□□□ -1.49
SNHG6-201ENST00000520348 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
SNHG6-201ENST00000520348 SPRR5A0A1B0GTR4 108 aa5.72□□□□□ -1.49
SNHG6-201ENST00000520348 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
SNHG6-201ENST00000520348 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
SNHG6-201ENST00000520348 LCE3CQ5T5A8 94 aa5.63□□□□□ -1.51
SNHG6-201ENST00000520348 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
SNHG6-201ENST00000520348 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
SNHG6-201ENST00000520348 MT1GP13640 62 aa5.56□□□□□ -1.52
SNHG6-201ENST00000520348 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
SNHG6-201ENST00000520348 MT1MQ8N339 61 aa5.51□□□□□ -1.53
SNHG6-201ENST00000520348 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
SNHG6-201ENST00000520348 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
SNHG6-201ENST00000520348 SPRR2EP22531 72 aa5.38□□□□□ -1.55
SNHG6-201ENST00000520348 SPRR2BP35325 72 aa5.38□□□□□ -1.55
SNHG6-201ENST00000520348 SPRR2AP35326 72 aa5.38□□□□□ -1.55
SNHG6-201ENST00000520348 NEBP20929 6669 aa5.36□□□□□ -1.55
SNHG6-201ENST00000520348 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
SNHG6-201ENST00000520348 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
SNHG6-201ENST00000520348 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
SNHG6-201ENST00000520348 KRTAP20-1Q3LI63 56 aa5.3□□□□□ -1.56
SNHG6-201ENST00000520348 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
SNHG6-201ENST00000520348 SPRR2DP22532 72 aa5.19□□□□□ -1.58
SNHG6-201ENST00000520348 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
SNHG6-201ENST00000520348 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
SNHG6-201ENST00000520348 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
SNHG6-201ENST00000520348 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
SNHG6-201ENST00000520348 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SNHG6-201ENST00000520348 MT1AP04731 61 aa4.89□□□□□ -1.63
SNHG6-201ENST00000520348 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
SNHG6-201ENST00000520348 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
SNHG6-201ENST00000520348 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
SNHG6-201ENST00000520348 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
SNHG6-201ENST00000520348 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SNHG6-201ENST00000520348 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
SNHG6-201ENST00000520348 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
SNHG6-201ENST00000520348 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
SNHG6-201ENST00000520348 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
SNHG6-201ENST00000520348 MT4P47944 62 aa4.46□□□□□ -1.7
SNHG6-201ENST00000520348 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
SNHG6-201ENST00000520348 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
SNHG6-201ENST00000520348 MT3P25713 68 aa4.4□□□□□ -1.71
SNHG6-201ENST00000520348 INE1O15225 51 aa4.38□□□□□ -1.71
SNHG6-201ENST00000520348 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
SNHG6-201ENST00000520348 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
SNHG6-201ENST00000520348 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
SNHG6-201ENST00000520348 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.75
SNHG6-201ENST00000520348 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
SNHG6-201ENST00000520348 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
SNHG6-201ENST00000520348 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
SNHG6-201ENST00000520348 KRTAP5-7Q6L8G8 165 aa4.08□□□□□ -1.76
SNHG6-201ENST00000520348 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SNHG6-201ENST00000520348 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
SNHG6-201ENST00000520348 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
SNHG6-201ENST00000520348 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
SNHG6-201ENST00000520348 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
SNHG6-201ENST00000520348 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
SNHG6-201ENST00000520348 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
SNHG6-201ENST00000520348 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
SNHG6-201ENST00000520348 PRM1P04553 51 aa3.55□□□□□ -1.84
SNHG6-201ENST00000520348 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
SNHG6-201ENST00000520348 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SNHG6-201ENST00000520348 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
SNHG6-201ENST00000520348 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SNHG6-201ENST00000520348 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
SNHG6-201ENST00000520348 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SNHG6-201ENST00000520348 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 121.2 ms