RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 KRTAP12-3P60328 96 aa7.94□□□□□ -1.14
PTP4A3-203ENST00000520105 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
PTP4A3-203ENST00000520105 MT1EP04732 61 aa7.87□□□□□ -1.15
PTP4A3-203ENST00000520105 MDN1Q9NU22 5596 aa7.79□□□□□ -1.16
PTP4A3-203ENST00000520105 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
PTP4A3-203ENST00000520105 MT1LQ93083 61 aa7.66□□□□□ -1.18
PTP4A3-203ENST00000520105 LCE1AQ5T7P2 110 aa7.64□□□□□ -1.19
PTP4A3-203ENST00000520105 SPRR2EP22531 72 aa7.62□□□□□ -1.19
PTP4A3-203ENST00000520105 SPRR2BP35325 72 aa7.62□□□□□ -1.19
PTP4A3-203ENST00000520105 SPRR2AP35326 72 aa7.62□□□□□ -1.19
PTP4A3-203ENST00000520105 KRTAP19-3Q7Z4W3 81 aa7.62□□□□□ -1.19
PTP4A3-203ENST00000520105 NEBP20929 6669 aa7.54□□□□□ -1.2
PTP4A3-203ENST00000520105 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
PTP4A3-203ENST00000520105 MT1GP13640 62 aa7.51□□□□□ -1.21
PTP4A3-203ENST00000520105 KRTAP4-7Q9BYR0 210 aa7.44□□□□□ -1.22
PTP4A3-203ENST00000520105 MT1MQ8N339 61 aa7.43□□□□□ -1.22
PTP4A3-203ENST00000520105 LCE3CQ5T5A8 94 aa7.39□□□□□ -1.23
PTP4A3-203ENST00000520105 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
PTP4A3-203ENST00000520105 SPRR2DP22532 72 aa7.34□□□□□ -1.23
PTP4A3-203ENST00000520105 KRTAP4-3Q9BYR4 195 aa7.32□□□□□ -1.24
PTP4A3-203ENST00000520105 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
PTP4A3-203ENST00000520105 LCE3BQ5TA77 95 aa7.08□□□□□ -1.28
PTP4A3-203ENST00000520105 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
PTP4A3-203ENST00000520105 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
PTP4A3-203ENST00000520105 KRTAP2-3P0C7H8 128 aa7□□□□□ -1.29
PTP4A3-203ENST00000520105 KRTAP2-4Q9BYR9 128 aa7□□□□□ -1.29
PTP4A3-203ENST00000520105 INE1O15225 51 aa6.97□□□□□ -1.29
PTP4A3-203ENST00000520105 KRTAP20-1Q3LI63 56 aa6.96□□□□□ -1.29
PTP4A3-203ENST00000520105 KRTAP2-2Q9BYT5 123 aa6.83□□□□□ -1.32
PTP4A3-203ENST00000520105 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
PTP4A3-203ENST00000520105 KRTAP5-5Q701N2 237 aaPredicted RBP6.73□□□□□ -1.33
PTP4A3-203ENST00000520105 KRTAP5-4Q6L8H1 288 aa6.56□□□□□ -1.36
PTP4A3-203ENST00000520105 MT1AP04731 61 aa6.5□□□□□ -1.37
PTP4A3-203ENST00000520105 KRTAP6-1Q3LI64 71 aa6.48□□□□□ -1.37
PTP4A3-203ENST00000520105 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
PTP4A3-203ENST00000520105 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
PTP4A3-203ENST00000520105 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
PTP4A3-203ENST00000520105 MT4P47944 62 aa6.41□□□□□ -1.38
PTP4A3-203ENST00000520105 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
PTP4A3-203ENST00000520105 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
PTP4A3-203ENST00000520105 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
PTP4A3-203ENST00000520105 HMCN1Q96RW7 5635 aa6.29□□□□□ -1.4
PTP4A3-203ENST00000520105 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
PTP4A3-203ENST00000520105 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
PTP4A3-203ENST00000520105 KRTAP6-2Q3LI66 62 aa6.02□□□□□ -1.44
PTP4A3-203ENST00000520105 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
PTP4A3-203ENST00000520105 MT3P25713 68 aa5.91□□□□□ -1.46
PTP4A3-203ENST00000520105 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
PTP4A3-203ENST00000520105 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
PTP4A3-203ENST00000520105 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
PTP4A3-203ENST00000520105 LCE3DQ9BYE3 92 aa5.5□□□□□ -1.53
PTP4A3-203ENST00000520105 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
PTP4A3-203ENST00000520105 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
PTP4A3-203ENST00000520105 GPR98Q8WXG9 6306 aa5.41□□□□□ -1.54
PTP4A3-203ENST00000520105 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
PTP4A3-203ENST00000520105 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
PTP4A3-203ENST00000520105 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
PTP4A3-203ENST00000520105 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
PTP4A3-203ENST00000520105 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
PTP4A3-203ENST00000520105 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
PTP4A3-203ENST00000520105 LCE1BQ5T7P3 118 aa4.92□□□□□ -1.62
PTP4A3-203ENST00000520105 PRM1P04553 51 aa4.9□□□□□ -1.62
PTP4A3-203ENST00000520105 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
PTP4A3-203ENST00000520105 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
PTP4A3-203ENST00000520105 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
PTP4A3-203ENST00000520105 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
PTP4A3-203ENST00000520105 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
PTP4A3-203ENST00000520105 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
PTP4A3-203ENST00000520105 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
PTP4A3-203ENST00000520105 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
PTP4A3-203ENST00000520105 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
PTP4A3-203ENST00000520105 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
PTP4A3-203ENST00000520105 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.8
PTP4A3-203ENST00000520105 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
PTP4A3-203ENST00000520105 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
PTP4A3-203ENST00000520105 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
PTP4A3-203ENST00000520105 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms