RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 UQCR11O14957 56 aa2.18□□□□□ -2.06
IGKV3D-25-201ENST00000519599 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
IGKV3D-25-201ENST00000519599 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
IGKV3D-25-201ENST00000519599 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
IGKV3D-25-201ENST00000519599 C10orf95Q9H7T3 257 aa2.16□□□□□ -2.06
IGKV3D-25-201ENST00000519599 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
IGKV3D-25-201ENST00000519599 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
IGKV3D-25-201ENST00000519599 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
IGKV3D-25-201ENST00000519599 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
IGKV3D-25-201ENST00000519599 MT4P47944 62 aa2.13□□□□□ -2.07
IGKV3D-25-201ENST00000519599 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
IGKV3D-25-201ENST00000519599 A6NED7 52 aa2.12□□□□□ -2.07
IGKV3D-25-201ENST00000519599 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
IGKV3D-25-201ENST00000519599 KRTAP4-7Q9BYR0 210 aa2.12□□□□□ -2.07
IGKV3D-25-201ENST00000519599 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
IGKV3D-25-201ENST00000519599 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
IGKV3D-25-201ENST00000519599 K7ERS5 55 aa2.09□□□□□ -2.07
IGKV3D-25-201ENST00000519599 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
IGKV3D-25-201ENST00000519599 TNP1P09430 55 aa2.06□□□□□ -2.08
IGKV3D-25-201ENST00000519599 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
IGKV3D-25-201ENST00000519599 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
IGKV3D-25-201ENST00000519599 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
IGKV3D-25-201ENST00000519599 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
IGKV3D-25-201ENST00000519599 LOC100996750A0A140TA64 210 aa2.01□□□□□ -2.09
IGKV3D-25-201ENST00000519599 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
IGKV3D-25-201ENST00000519599 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
IGKV3D-25-201ENST00000519599 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
IGKV3D-25-201ENST00000519599 KRTAP25-1Q3LHN0 102 aa1.98□□□□□ -2.09
IGKV3D-25-201ENST00000519599 BRK1Q8WUW1 75 aa1.98□□□□□ -2.09
IGKV3D-25-201ENST00000519599 ROMO1P60602 79 aa1.97□□□□□ -2.09
IGKV3D-25-201ENST00000519599 KRTAP23-1A1A580 65 aa1.9□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP15-1Q3LI76 137 aa1.88□□□□□ -2.11
IGKV3D-25-201ENST00000519599 LCE3CQ5T5A8 94 aa1.88□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
IGKV3D-25-201ENST00000519599 PMAIP1Q13794 54 aa1.87□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP19-4Q3LI73 84 aa1.87□□□□□ -2.11
IGKV3D-25-201ENST00000519599 MT1AP04731 61 aa1.86□□□□□ -2.11
IGKV3D-25-201ENST00000519599 PRO0628Q9UI54 55 aa1.85□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP4-11Q9BYQ6 195 aa1.84□□□□□ -2.11
IGKV3D-25-201ENST00000519599 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
IGKV3D-25-201ENST00000519599 KRTAP9-4Q9BYQ2 154 aa1.8□□□□□ -2.12
IGKV3D-25-201ENST00000519599 PRAC1Q96KF2 57 aa1.78□□□□□ -2.12
IGKV3D-25-201ENST00000519599 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
IGKV3D-25-201ENST00000519599 KTN1-AS1Q86SY8 53 aa1.74□□□□□ -2.13
IGKV3D-25-201ENST00000519599 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
IGKV3D-25-201ENST00000519599 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
IGKV3D-25-201ENST00000519599 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
IGKV3D-25-201ENST00000519599 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
IGKV3D-25-201ENST00000519599 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
IGKV3D-25-201ENST00000519599 SVIPQ8NHG7 77 aa1.67□□□□□ -2.14
IGKV3D-25-201ENST00000519599 MT3P25713 68 aa1.66□□□□□ -2.14
IGKV3D-25-201ENST00000519599 KRTAP9-9Q9BYP9 154 aa1.64□□□□□ -2.15
IGKV3D-25-201ENST00000519599 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
IGKV3D-25-201ENST00000519599 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
IGKV3D-25-201ENST00000519599 LUZP6Q538Z0 58 aa1.48□□□□□ -2.17
IGKV3D-25-201ENST00000519599 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
IGKV3D-25-201ENST00000519599 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
IGKV3D-25-201ENST00000519599 KRTAP4-12Q9BQ66 201 aa1.37□□□□□ -2.19
IGKV3D-25-201ENST00000519599 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
IGKV3D-25-201ENST00000519599 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
IGKV3D-25-201ENST00000519599 NDUFAF8A1L188 74 aa1.33□□□□□ -2.2
IGKV3D-25-201ENST00000519599 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
IGKV3D-25-201ENST00000519599 LCE1FQ5T754 118 aa1.29□□□□□ -2.2
IGKV3D-25-201ENST00000519599 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
IGKV3D-25-201ENST00000519599 LCE3EQ5T5B0 92 aa1.24□□□□□ -2.21
IGKV3D-25-201ENST00000519599 H3BS24 57 aa1.21□□□□□ -2.22
IGKV3D-25-201ENST00000519599 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
IGKV3D-25-201ENST00000519599 A0A0A0MQY5 61 aa1.13□□□□□ -2.23
IGKV3D-25-201ENST00000519599 KRTAP4-4Q9BYR3 166 aa1.13□□□□□ -2.23
IGKV3D-25-201ENST00000519599 INE1O15225 51 aa1.08□□□□□ -2.24
IGKV3D-25-201ENST00000519599 MUC19Q7Z5P9 8384 aa1.07□□□□□ -2.24
IGKV3D-25-201ENST00000519599 PRM1P04553 51 aa1.01□□□□□ -2.25
IGKV3D-25-201ENST00000519599 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
IGKV3D-25-201ENST00000519599 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 137.7 ms