RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, human

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE2-205	ENST00000519535	KRTAP4-3	Q9BYR4	195 aa		4.82	□□□□□ -1.64
SCUBE2-205	ENST00000519535		H3BS24	57 aa		4.81	□□□□□ -1.64
SCUBE2-205	ENST00000519535	LINC01558	Q9Y6Z2	57 aa		4.8	□□□□□ -1.64
SCUBE2-205	ENST00000519535	HMCN1	Q96RW7	5635 aa		4.8	□□□□□ -1.64
SCUBE2-205	ENST00000519535	ATP5E	P56381	51 aa	Predicted RBP	4.76	□□□□□ -1.65
SCUBE2-205	ENST00000519535	TNP1	P09430	55 aa		4.73	□□□□□ -1.65
SCUBE2-205	ENST00000519535	PRR15L	Q9BU68	103 aa		4.71	□□□□□ -1.66
SCUBE2-205	ENST00000519535	KRTAP4-7	Q9BYR0	210 aa		4.71	□□□□□ -1.66
SCUBE2-205	ENST00000519535	PCP4	P48539	62 aa		4.69	□□□□□ -1.66
SCUBE2-205	ENST00000519535	TMEM258	P61165	79 aa		4.69	□□□□□ -1.66
SCUBE2-205	ENST00000519535	LCE1D	Q5T752	114 aa		4.69	□□□□□ -1.66
SCUBE2-205	ENST00000519535	AHNAK2	Q8IVF2	5795 aa		4.69	□□□□□ -1.66
SCUBE2-205	ENST00000519535	PP632	Q6XCG6	107 aa		4.68	□□□□□ -1.66
SCUBE2-205	ENST00000519535	MT4	P47944	62 aa		4.63	□□□□□ -1.67
SCUBE2-205	ENST00000519535	KRTAP12-3	P60328	96 aa		4.62	□□□□□ -1.67
SCUBE2-205	ENST00000519535	UQCR11	O14957	56 aa		4.6	□□□□□ -1.67
SCUBE2-205	ENST00000519535	LCE4A	Q5TA78	99 aa		4.6	□□□□□ -1.67
SCUBE2-205	ENST00000519535	KRTAP5-4	Q6L8H1	288 aa		4.6	□□□□□ -1.67
SCUBE2-205	ENST00000519535	MIR22HG	Q0VDD5	57 aa		4.55	□□□□□ -1.68
SCUBE2-205	ENST00000519535	PSPHP1	O15172	72 aa		4.52	□□□□□ -1.69
SCUBE2-205	ENST00000519535	SYNE1	Q8NF91	8797 aa	Known RBP	4.47	□□□□□ -1.69
SCUBE2-205	ENST00000519535	KRTAP25-1	Q3LHN0	102 aa		4.46	□□□□□ -1.7
SCUBE2-205	ENST00000519535	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.46	□□□□□ -1.7
SCUBE2-205	ENST00000519535	KRTAP4-2	Q9BYR5	136 aa		4.46	□□□□□ -1.7
SCUBE2-205	ENST00000519535		A0A0A0MQY5	61 aa		4.45	□□□□□ -1.7
SCUBE2-205	ENST00000519535		Q1T7F1	81 aa		4.44	□□□□□ -1.7
SCUBE2-205	ENST00000519535	KRTAP5-10	Q6L8G5	202 aa		4.37	□□□□□ -1.71
SCUBE2-205	ENST00000519535		V9GYY9	64 aa		4.35	□□□□□ -1.71
SCUBE2-205	ENST00000519535	KRTAP20-2	Q3LI61	65 aa		4.34	□□□□□ -1.71
SCUBE2-205	ENST00000519535		K7ERS5	55 aa		4.31	□□□□□ -1.72
SCUBE2-205	ENST00000519535	KRTAP15-1	Q3LI76	137 aa		4.29	□□□□□ -1.72
SCUBE2-205	ENST00000519535	KRTAP23-1	A1A580	65 aa		4.27	□□□□□ -1.73
SCUBE2-205	ENST00000519535		A6NED7	52 aa		4.27	□□□□□ -1.73
SCUBE2-205	ENST00000519535	LCE3C	Q5T5A8	94 aa		4.26	□□□□□ -1.73
SCUBE2-205	ENST00000519535	KRTAP4-11	Q9BYQ6	195 aa		4.26	□□□□□ -1.73
SCUBE2-205	ENST00000519535	SPRR5	A0A1B0GTR4	108 aa		4.25	□□□□□ -1.73
SCUBE2-205	ENST00000519535	KRTAP5-3	Q6L8H2	238 aa		4.25	□□□□□ -1.73
SCUBE2-205	ENST00000519535	KRTAP12-4	P60329	112 aa		4.19	□□□□□ -1.74
SCUBE2-205	ENST00000519535	KRTAP19-4	Q3LI73	84 aa		4.18	□□□□□ -1.74
SCUBE2-205	ENST00000519535	KRTAP9-6	A8MVA2	160 aa		4.17	□□□□□ -1.74
SCUBE2-205	ENST00000519535	CDC42SE1	Q9NRR8	79 aa		4.17	□□□□□ -1.74
SCUBE2-205	ENST00000519535	ROMO1	P60602	79 aa		4.16	□□□□□ -1.74
SCUBE2-205	ENST00000519535	KRTAP5-7	Q6L8G8	165 aa		4.16	□□□□□ -1.74
SCUBE2-205	ENST00000519535	RPS28	P62857	69 aa	Known RBP	4.15	□□□□□ -1.75
SCUBE2-205	ENST00000519535	KRTAP6-1	Q3LI64	71 aa		4.13	□□□□□ -1.75
SCUBE2-205	ENST00000519535	MT1A	P04731	61 aa		4.09	□□□□□ -1.75
SCUBE2-205	ENST00000519535	KRTAP5-2	Q701N4	177 aa		4.05	□□□□□ -1.76
SCUBE2-205	ENST00000519535	KRTAP6-2	Q3LI66	62 aa		3.92	□□□□□ -1.78
SCUBE2-205	ENST00000519535	AHNAK	Q09666	5890 aa	Known RBP	3.89	□□□□□ -1.79
SCUBE2-205	ENST00000519535	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.86	□□□□□ -1.79
SCUBE2-205	ENST00000519535	KRTAP5-8	O75690	187 aa		3.85	□□□□□ -1.79
SCUBE2-205	ENST00000519535	OBSCN	Q5VST9	7968 aa		3.81	□□□□□ -1.8
SCUBE2-205	ENST00000519535	MUC5AC	P98088	5654 aa		3.8	□□□□□ -1.8
SCUBE2-205	ENST00000519535	MT3	P25713	68 aa		3.68	□□□□□ -1.82
SCUBE2-205	ENST00000519535	PRAC1	Q96KF2	57 aa		3.67	□□□□□ -1.82
SCUBE2-205	ENST00000519535	KRTAP5-1	Q6L8H4	278 aa		3.64	□□□□□ -1.83
SCUBE2-205	ENST00000519535	BRK1	Q8WUW1	75 aa		3.64	□□□□□ -1.83
SCUBE2-205	ENST00000519535	PRO0628	Q9UI54	55 aa		3.51	□□□□□ -1.85
SCUBE2-205	ENST00000519535	PMAIP1	Q13794	54 aa		3.39	□□□□□ -1.87
SCUBE2-205	ENST00000519535	LCE1E	Q5T753	118 aa		3.39	□□□□□ -1.87
SCUBE2-205	ENST00000519535	LCE1B	Q5T7P3	118 aa		3.24	□□□□□ -1.89
SCUBE2-205	ENST00000519535	LUZP6	Q538Z0	58 aa		3.16	□□□□□ -1.9
SCUBE2-205	ENST00000519535	LCE1C	Q5T751	118 aa		3.16	□□□□□ -1.9
SCUBE2-205	ENST00000519535	NDUFAF8	A1L188	74 aa		3.14	□□□□□ -1.91
SCUBE2-205	ENST00000519535	KTN1-AS1	Q86SY8	53 aa		3.11	□□□□□ -1.91
SCUBE2-205	ENST00000519535	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.07	□□□□□ -1.92
SCUBE2-205	ENST00000519535	LCE3D	Q9BYE3	92 aa		3.03	□□□□□ -1.92
SCUBE2-205	ENST00000519535	KRTAP5-11	Q6L8G4	156 aa		2.89	□□□□□ -1.95
SCUBE2-205	ENST00000519535	LCE3E	Q5T5B0	92 aa		2.84	□□□□□ -1.95
SCUBE2-205	ENST00000519535	KRTAP21-2	Q3LI59	83 aa		2.73	□□□□□ -1.97
SCUBE2-205	ENST00000519535	LCE1F	Q5T754	118 aa		2.73	□□□□□ -1.97
SCUBE2-205	ENST00000519535	KRTAP4-4	Q9BYR3	166 aa		2.56	□□□□□ -2
SCUBE2-205	ENST00000519535	PHGR1	C9JFL3	82 aa		2.5	□□□□□ -2.01
SCUBE2-205	ENST00000519535	MUC19	Q7Z5P9	8384 aa		2.39	□□□□□ -2.03
SCUBE2-205	ENST00000519535	INE1	O15225	51 aa		2.25	□□□□□ -2.05
SCUBE2-205	ENST00000519535	PRM1	P04553	51 aa		2.18	□□□□□ -2.06
SCUBE2-205	ENST00000519535	KRTAP21-1	Q3LI58	79 aa		1.85	□□□□□ -2.11
SCUBE2-205	ENST00000519535	MUC16	Q8WXI7	14507 aa		1.72	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 79.8 ms