RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 KTN1-AS1Q86SY8 53 aa7.47□□□□□ -1.21
CTNNA1-213ENST00000519113 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-213ENST00000519113 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
CTNNA1-213ENST00000519113 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
CTNNA1-213ENST00000519113 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
CTNNA1-213ENST00000519113 PRAC1Q96KF2 57 aa7.29□□□□□ -1.24
CTNNA1-213ENST00000519113 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
CTNNA1-213ENST00000519113 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
CTNNA1-213ENST00000519113 TNP1P09430 55 aa7.19□□□□□ -1.26
CTNNA1-213ENST00000519113 LCE1DQ5T752 114 aa7.16□□□□□ -1.26
CTNNA1-213ENST00000519113 KRTAP19-3Q7Z4W3 81 aa7.15□□□□□ -1.26
CTNNA1-213ENST00000519113 KRTAP19-7Q3SYF9 63 aa7.1□□□□□ -1.27
CTNNA1-213ENST00000519113 MT1EP04732 61 aa7.08□□□□□ -1.28
CTNNA1-213ENST00000519113 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
CTNNA1-213ENST00000519113 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
CTNNA1-213ENST00000519113 MT4P47944 62 aa7.01□□□□□ -1.29
CTNNA1-213ENST00000519113 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
CTNNA1-213ENST00000519113 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CTNNA1-213ENST00000519113 AHNAK2Q8IVF2 5795 aa6.95□□□□□ -1.3
CTNNA1-213ENST00000519113 MT1GP13640 62 aa6.93□□□□□ -1.3
CTNNA1-213ENST00000519113 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
CTNNA1-213ENST00000519113 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
CTNNA1-213ENST00000519113 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
CTNNA1-213ENST00000519113 KRTAP5-4Q6L8H1 288 aa6.78□□□□□ -1.32
CTNNA1-213ENST00000519113 MT1MQ8N339 61 aa6.78□□□□□ -1.32
CTNNA1-213ENST00000519113 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
CTNNA1-213ENST00000519113 KRTAP5-7Q6L8G8 165 aa6.73□□□□□ -1.33
CTNNA1-213ENST00000519113 MT1LQ93083 61 aa6.68□□□□□ -1.34
CTNNA1-213ENST00000519113 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
CTNNA1-213ENST00000519113 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
CTNNA1-213ENST00000519113 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
CTNNA1-213ENST00000519113 SPRR5A0A1B0GTR4 108 aa6.46□□□□□ -1.38
CTNNA1-213ENST00000519113 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
CTNNA1-213ENST00000519113 KRTAP20-2Q3LI61 65 aa6.44□□□□□ -1.38
CTNNA1-213ENST00000519113 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
CTNNA1-213ENST00000519113 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
CTNNA1-213ENST00000519113 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-213ENST00000519113 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
CTNNA1-213ENST00000519113 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
CTNNA1-213ENST00000519113 SYNE1Q8NF91 8797 aaKnown RBP6.06□□□□□ -1.44
CTNNA1-213ENST00000519113 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
CTNNA1-213ENST00000519113 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
CTNNA1-213ENST00000519113 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
CTNNA1-213ENST00000519113 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
CTNNA1-213ENST00000519113 MUC5ACP98088 5654 aa5.85□□□□□ -1.47
CTNNA1-213ENST00000519113 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
CTNNA1-213ENST00000519113 MUC5BQ9HC84 5762 aaPredicted RBP5.81□□□□□ -1.48
CTNNA1-213ENST00000519113 NDUFAF8A1L188 74 aa5.81□□□□□ -1.48
CTNNA1-213ENST00000519113 KRTAP5-8O75690 187 aa5.81□□□□□ -1.48
CTNNA1-213ENST00000519113 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
CTNNA1-213ENST00000519113 MT1AP04731 61 aa5.67□□□□□ -1.5
CTNNA1-213ENST00000519113 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
CTNNA1-213ENST00000519113 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
CTNNA1-213ENST00000519113 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
CTNNA1-213ENST00000519113 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
CTNNA1-213ENST00000519113 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
CTNNA1-213ENST00000519113 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
CTNNA1-213ENST00000519113 MT3P25713 68 aa5.24□□□□□ -1.57
CTNNA1-213ENST00000519113 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
CTNNA1-213ENST00000519113 H3BS24 57 aa5.07□□□□□ -1.6
CTNNA1-213ENST00000519113 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
CTNNA1-213ENST00000519113 INE1O15225 51 aa4.83□□□□□ -1.64
CTNNA1-213ENST00000519113 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
CTNNA1-213ENST00000519113 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
CTNNA1-213ENST00000519113 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
CTNNA1-213ENST00000519113 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
CTNNA1-213ENST00000519113 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
CTNNA1-213ENST00000519113 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
CTNNA1-213ENST00000519113 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
CTNNA1-213ENST00000519113 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
CTNNA1-213ENST00000519113 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
CTNNA1-213ENST00000519113 PHGR1C9JFL3 82 aa4.06□□□□□ -1.76
CTNNA1-213ENST00000519113 PRM1P04553 51 aa3.91□□□□□ -1.78
CTNNA1-213ENST00000519113 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
CTNNA1-213ENST00000519113 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
CTNNA1-213ENST00000519113 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
CTNNA1-213ENST00000519113 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
CTNNA1-213ENST00000519113 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 91.6 ms