RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 KRTAP2-1Q9BYU5 128 aa7.43□□□□□ -1.22
TNFRSF10B-204ENST00000519028 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
TNFRSF10B-204ENST00000519028 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
TNFRSF10B-204ENST00000519028 MT1GP13640 62 aa7.33□□□□□ -1.24
TNFRSF10B-204ENST00000519028 MT1LQ93083 61 aa7.3□□□□□ -1.24
TNFRSF10B-204ENST00000519028 CDC42SE1Q9NRR8 79 aa7.29□□□□□ -1.24
TNFRSF10B-204ENST00000519028 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
TNFRSF10B-204ENST00000519028 DSTQ03001 7570 aaKnown RBP7.24□□□□□ -1.25
TNFRSF10B-204ENST00000519028 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
TNFRSF10B-204ENST00000519028 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
TNFRSF10B-204ENST00000519028 MT1MQ8N339 61 aa7.2□□□□□ -1.26
TNFRSF10B-204ENST00000519028 ROMO1P60602 79 aa7.13□□□□□ -1.27
TNFRSF10B-204ENST00000519028 KRTAP4-3Q9BYR4 195 aa7.04□□□□□ -1.28
TNFRSF10B-204ENST00000519028 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
TNFRSF10B-204ENST00000519028 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
TNFRSF10B-204ENST00000519028 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
TNFRSF10B-204ENST00000519028 KRTAP4-9Q9BYQ8 210 aa6.82□□□□□ -1.32
TNFRSF10B-204ENST00000519028 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
TNFRSF10B-204ENST00000519028 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
TNFRSF10B-204ENST00000519028 KRTAP5-4Q6L8H1 288 aa6.72□□□□□ -1.33
TNFRSF10B-204ENST00000519028 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
TNFRSF10B-204ENST00000519028 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
TNFRSF10B-204ENST00000519028 MT4P47944 62 aa6.64□□□□□ -1.35
TNFRSF10B-204ENST00000519028 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
TNFRSF10B-204ENST00000519028 KRTAP5-5Q701N2 237 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF10B-204ENST00000519028 HMCN1Q96RW7 5635 aa6.52□□□□□ -1.37
TNFRSF10B-204ENST00000519028 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
TNFRSF10B-204ENST00000519028 GPR98Q8WXG9 6306 aa6.48□□□□□ -1.37
TNFRSF10B-204ENST00000519028 PMAIP1Q13794 54 aa6.45□□□□□ -1.38
TNFRSF10B-204ENST00000519028 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
TNFRSF10B-204ENST00000519028 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
TNFRSF10B-204ENST00000519028 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
TNFRSF10B-204ENST00000519028 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
TNFRSF10B-204ENST00000519028 SYNE1Q8NF91 8797 aaKnown RBP6.28□□□□□ -1.4
TNFRSF10B-204ENST00000519028 PRO0628Q9UI54 55 aa6.23□□□□□ -1.41
TNFRSF10B-204ENST00000519028 MT1AP04731 61 aa6.2□□□□□ -1.42
TNFRSF10B-204ENST00000519028 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
TNFRSF10B-204ENST00000519028 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
TNFRSF10B-204ENST00000519028 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
TNFRSF10B-204ENST00000519028 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
TNFRSF10B-204ENST00000519028 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
TNFRSF10B-204ENST00000519028 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
TNFRSF10B-204ENST00000519028 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
TNFRSF10B-204ENST00000519028 KTN1-AS1Q86SY8 53 aa5.87□□□□□ -1.47
TNFRSF10B-204ENST00000519028 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
TNFRSF10B-204ENST00000519028 KRTAP5-7Q6L8G8 165 aa5.79□□□□□ -1.48
TNFRSF10B-204ENST00000519028 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
TNFRSF10B-204ENST00000519028 MT3P25713 68 aa5.68□□□□□ -1.5
TNFRSF10B-204ENST00000519028 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
TNFRSF10B-204ENST00000519028 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
TNFRSF10B-204ENST00000519028 KRTAP5-8O75690 187 aa5.5□□□□□ -1.53
TNFRSF10B-204ENST00000519028 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
TNFRSF10B-204ENST00000519028 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
TNFRSF10B-204ENST00000519028 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
TNFRSF10B-204ENST00000519028 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
TNFRSF10B-204ENST00000519028 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
TNFRSF10B-204ENST00000519028 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
TNFRSF10B-204ENST00000519028 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
TNFRSF10B-204ENST00000519028 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
TNFRSF10B-204ENST00000519028 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
TNFRSF10B-204ENST00000519028 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
TNFRSF10B-204ENST00000519028 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
TNFRSF10B-204ENST00000519028 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
TNFRSF10B-204ENST00000519028 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
TNFRSF10B-204ENST00000519028 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
TNFRSF10B-204ENST00000519028 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
TNFRSF10B-204ENST00000519028 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
TNFRSF10B-204ENST00000519028 H3BS24 57 aa4.22□□□□□ -1.73
TNFRSF10B-204ENST00000519028 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
TNFRSF10B-204ENST00000519028 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
TNFRSF10B-204ENST00000519028 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
TNFRSF10B-204ENST00000519028 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
TNFRSF10B-204ENST00000519028 INE1O15225 51 aa3.64□□□□□ -1.83
TNFRSF10B-204ENST00000519028 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
TNFRSF10B-204ENST00000519028 PRM1P04553 51 aa3.63□□□□□ -1.83
TNFRSF10B-204ENST00000519028 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
TNFRSF10B-204ENST00000519028 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
TNFRSF10B-204ENST00000519028 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 122.8 ms