RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
TRAPPC9-204ENST00000518723 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
TRAPPC9-204ENST00000518723 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
TRAPPC9-204ENST00000518723 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
TRAPPC9-204ENST00000518723 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
TRAPPC9-204ENST00000518723 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
TRAPPC9-204ENST00000518723 SERP1Q9Y6X1 66 aa4.23□□□□□ -1.73
TRAPPC9-204ENST00000518723 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
TRAPPC9-204ENST00000518723 SMIM26A0A096LP01 95 aa4.19□□□□□ -1.74
TRAPPC9-204ENST00000518723 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
TRAPPC9-204ENST00000518723 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
TRAPPC9-204ENST00000518723 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
TRAPPC9-204ENST00000518723 H7BZZ5 65 aa4.13□□□□□ -1.75
TRAPPC9-204ENST00000518723 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC9-204ENST00000518723 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
TRAPPC9-204ENST00000518723 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
TRAPPC9-204ENST00000518723 SPINT4Q6UDR6 99 aa4.1□□□□□ -1.75
TRAPPC9-204ENST00000518723 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
TRAPPC9-204ENST00000518723 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
TRAPPC9-204ENST00000518723 V9GYY9 64 aa4.06□□□□□ -1.76
TRAPPC9-204ENST00000518723 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
TRAPPC9-204ENST00000518723 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
TRAPPC9-204ENST00000518723 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
TRAPPC9-204ENST00000518723 Q1T7F1 81 aa4□□□□□ -1.77
TRAPPC9-204ENST00000518723 SPANXA2-OT1Q8N9U9 137 aa4□□□□□ -1.77
TRAPPC9-204ENST00000518723 TNP1P09430 55 aa3.99□□□□□ -1.77
TRAPPC9-204ENST00000518723 SEC61GP60059 68 aa3.99□□□□□ -1.77
TRAPPC9-204ENST00000518723 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
TRAPPC9-204ENST00000518723 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
TRAPPC9-204ENST00000518723 A0A1B0GU33 70 aa3.96□□□□□ -1.78
TRAPPC9-204ENST00000518723 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
TRAPPC9-204ENST00000518723 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC9-204ENST00000518723 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
TRAPPC9-204ENST00000518723 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
TRAPPC9-204ENST00000518723 COA5Q86WW8 74 aa3.88□□□□□ -1.79
TRAPPC9-204ENST00000518723 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
TRAPPC9-204ENST00000518723 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
TRAPPC9-204ENST00000518723 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
TRAPPC9-204ENST00000518723 A8MU10 97 aa3.81□□□□□ -1.8
TRAPPC9-204ENST00000518723 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
TRAPPC9-204ENST00000518723 PSPHP1O15172 72 aa3.75□□□□□ -1.81
TRAPPC9-204ENST00000518723 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
TRAPPC9-204ENST00000518723 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
TRAPPC9-204ENST00000518723 A6NED7 52 aa3.72□□□□□ -1.81
TRAPPC9-204ENST00000518723 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
TRAPPC9-204ENST00000518723 MT1AP04731 61 aa3.7□□□□□ -1.82
TRAPPC9-204ENST00000518723 A0A1B0GU69 56 aa3.69□□□□□ -1.82
TRAPPC9-204ENST00000518723 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
TRAPPC9-204ENST00000518723 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
TRAPPC9-204ENST00000518723 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
TRAPPC9-204ENST00000518723 KRTAP25-1Q3LHN0 102 aa3.58□□□□□ -1.84
TRAPPC9-204ENST00000518723 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
TRAPPC9-204ENST00000518723 UQCR11O14957 56 aa3.54□□□□□ -1.84
TRAPPC9-204ENST00000518723 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
TRAPPC9-204ENST00000518723 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
TRAPPC9-204ENST00000518723 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
TRAPPC9-204ENST00000518723 MT3P25713 68 aa3.4□□□□□ -1.87
TRAPPC9-204ENST00000518723 PRAC1Q96KF2 57 aa3.39□□□□□ -1.87
TRAPPC9-204ENST00000518723 K7ERS5 55 aa3.36□□□□□ -1.87
TRAPPC9-204ENST00000518723 ROMO1P60602 79 aa3.32□□□□□ -1.88
TRAPPC9-204ENST00000518723 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
TRAPPC9-204ENST00000518723 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
TRAPPC9-204ENST00000518723 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
TRAPPC9-204ENST00000518723 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
TRAPPC9-204ENST00000518723 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
TRAPPC9-204ENST00000518723 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
TRAPPC9-204ENST00000518723 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
TRAPPC9-204ENST00000518723 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.7□□□□□ -1.98
TRAPPC9-204ENST00000518723 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
TRAPPC9-204ENST00000518723 INE1O15225 51 aa2.66□□□□□ -1.98
TRAPPC9-204ENST00000518723 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
TRAPPC9-204ENST00000518723 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
TRAPPC9-204ENST00000518723 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
TRAPPC9-204ENST00000518723 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
TRAPPC9-204ENST00000518723 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
TRAPPC9-204ENST00000518723 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
TRAPPC9-204ENST00000518723 PRM1P04553 51 aa1.65□□□□□ -2.15
TRAPPC9-204ENST00000518723 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 38.8 ms