RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 MT1EP04732 61 aa4.61□□□□□ -1.67
VEGFA-218ENST00000518689 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
VEGFA-218ENST00000518689 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
VEGFA-218ENST00000518689 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
VEGFA-218ENST00000518689 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
VEGFA-218ENST00000518689 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
VEGFA-218ENST00000518689 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
VEGFA-218ENST00000518689 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
VEGFA-218ENST00000518689 Q1T7F1 81 aa4.5□□□□□ -1.69
VEGFA-218ENST00000518689 A0A1B0GU69 56 aa4.48□□□□□ -1.69
VEGFA-218ENST00000518689 PSPHP1O15172 72 aa4.48□□□□□ -1.69
VEGFA-218ENST00000518689 A8MU10 97 aa4.47□□□□□ -1.69
VEGFA-218ENST00000518689 MT1GP13640 62 aa4.47□□□□□ -1.69
VEGFA-218ENST00000518689 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
VEGFA-218ENST00000518689 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
VEGFA-218ENST00000518689 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
VEGFA-218ENST00000518689 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
VEGFA-218ENST00000518689 MT1MQ8N339 61 aa4.4□□□□□ -1.71
VEGFA-218ENST00000518689 MT1LQ93083 61 aa4.4□□□□□ -1.71
VEGFA-218ENST00000518689 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
VEGFA-218ENST00000518689 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
VEGFA-218ENST00000518689 TNP1P09430 55 aa4.35□□□□□ -1.71
VEGFA-218ENST00000518689 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
VEGFA-218ENST00000518689 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
VEGFA-218ENST00000518689 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
VEGFA-218ENST00000518689 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
VEGFA-218ENST00000518689 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
VEGFA-218ENST00000518689 MT4P47944 62 aa4.26□□□□□ -1.73
VEGFA-218ENST00000518689 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
VEGFA-218ENST00000518689 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
VEGFA-218ENST00000518689 UQCR11O14957 56 aa4.18□□□□□ -1.74
VEGFA-218ENST00000518689 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
VEGFA-218ENST00000518689 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
VEGFA-218ENST00000518689 A6NED7 52 aa4.13□□□□□ -1.75
VEGFA-218ENST00000518689 ROMO1P60602 79 aa4.09□□□□□ -1.75
VEGFA-218ENST00000518689 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
VEGFA-218ENST00000518689 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
VEGFA-218ENST00000518689 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
VEGFA-218ENST00000518689 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
VEGFA-218ENST00000518689 K7ERS5 55 aa4.04□□□□□ -1.76
VEGFA-218ENST00000518689 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
VEGFA-218ENST00000518689 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
VEGFA-218ENST00000518689 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
VEGFA-218ENST00000518689 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
VEGFA-218ENST00000518689 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
VEGFA-218ENST00000518689 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
VEGFA-218ENST00000518689 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
VEGFA-218ENST00000518689 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
VEGFA-218ENST00000518689 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
VEGFA-218ENST00000518689 MT1AP04731 61 aa3.74□□□□□ -1.81
VEGFA-218ENST00000518689 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
VEGFA-218ENST00000518689 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
VEGFA-218ENST00000518689 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
VEGFA-218ENST00000518689 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
VEGFA-218ENST00000518689 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
VEGFA-218ENST00000518689 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
VEGFA-218ENST00000518689 MT3P25713 68 aa3.46□□□□□ -1.86
VEGFA-218ENST00000518689 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
VEGFA-218ENST00000518689 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
VEGFA-218ENST00000518689 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
VEGFA-218ENST00000518689 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
VEGFA-218ENST00000518689 INE1O15225 51 aa3.31□□□□□ -1.88
VEGFA-218ENST00000518689 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
VEGFA-218ENST00000518689 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
VEGFA-218ENST00000518689 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
VEGFA-218ENST00000518689 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
VEGFA-218ENST00000518689 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
VEGFA-218ENST00000518689 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
VEGFA-218ENST00000518689 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
VEGFA-218ENST00000518689 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
VEGFA-218ENST00000518689 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
VEGFA-218ENST00000518689 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
VEGFA-218ENST00000518689 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
VEGFA-218ENST00000518689 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
VEGFA-218ENST00000518689 PRM1P04553 51 aa1.91□□□□□ -2.1
VEGFA-218ENST00000518689 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
VEGFA-218ENST00000518689 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 39.7 ms