RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
TFF3-204ENST00000518498 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
TFF3-204ENST00000518498 GPR98Q8WXG9 6306 aa6.91□□□□□ -1.3
TFF3-204ENST00000518498 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
TFF3-204ENST00000518498 LOC100996750A0A140TA64 210 aa6.86□□□□□ -1.31
TFF3-204ENST00000518498 KRTAP4-6Q9BYQ5 205 aa6.86□□□□□ -1.31
TFF3-204ENST00000518498 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
TFF3-204ENST00000518498 LCE3AQ5TA76 89 aa6.8□□□□□ -1.32
TFF3-204ENST00000518498 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
TFF3-204ENST00000518498 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
TFF3-204ENST00000518498 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
TFF3-204ENST00000518498 KRTAP19-3Q7Z4W3 81 aa6.73□□□□□ -1.33
TFF3-204ENST00000518498 MT1EP04732 61 aa6.7□□□□□ -1.34
TFF3-204ENST00000518498 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
TFF3-204ENST00000518498 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
TFF3-204ENST00000518498 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
TFF3-204ENST00000518498 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
TFF3-204ENST00000518498 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
TFF3-204ENST00000518498 MT1GP13640 62 aa6.56□□□□□ -1.36
TFF3-204ENST00000518498 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
TFF3-204ENST00000518498 MT4P47944 62 aa6.52□□□□□ -1.37
TFF3-204ENST00000518498 MT1MQ8N339 61 aa6.41□□□□□ -1.38
TFF3-204ENST00000518498 HMCN1Q96RW7 5635 aa6.4□□□□□ -1.39
TFF3-204ENST00000518498 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
TFF3-204ENST00000518498 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
TFF3-204ENST00000518498 MT1LQ93083 61 aa6.35□□□□□ -1.39
TFF3-204ENST00000518498 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
TFF3-204ENST00000518498 KRTAP5-4Q6L8H1 288 aa6.33□□□□□ -1.4
TFF3-204ENST00000518498 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
TFF3-204ENST00000518498 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
TFF3-204ENST00000518498 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
TFF3-204ENST00000518498 KRTAP5-7Q6L8G8 165 aa6.14□□□□□ -1.43
TFF3-204ENST00000518498 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
TFF3-204ENST00000518498 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
TFF3-204ENST00000518498 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
TFF3-204ENST00000518498 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
TFF3-204ENST00000518498 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
TFF3-204ENST00000518498 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
TFF3-204ENST00000518498 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
TFF3-204ENST00000518498 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
TFF3-204ENST00000518498 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
TFF3-204ENST00000518498 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
TFF3-204ENST00000518498 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
TFF3-204ENST00000518498 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
TFF3-204ENST00000518498 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
TFF3-204ENST00000518498 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
TFF3-204ENST00000518498 KRTAP5-2Q701N4 177 aa5.47□□□□□ -1.53
TFF3-204ENST00000518498 MT1AP04731 61 aa5.44□□□□□ -1.54
TFF3-204ENST00000518498 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
TFF3-204ENST00000518498 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
TFF3-204ENST00000518498 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
TFF3-204ENST00000518498 MUC5ACP98088 5654 aa5.27□□□□□ -1.57
TFF3-204ENST00000518498 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
TFF3-204ENST00000518498 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
TFF3-204ENST00000518498 OBSCNQ5VST9 7968 aa5.23□□□□□ -1.57
TFF3-204ENST00000518498 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
TFF3-204ENST00000518498 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
TFF3-204ENST00000518498 MT3P25713 68 aa4.98□□□□□ -1.61
TFF3-204ENST00000518498 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
TFF3-204ENST00000518498 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
TFF3-204ENST00000518498 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
TFF3-204ENST00000518498 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
TFF3-204ENST00000518498 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
TFF3-204ENST00000518498 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
TFF3-204ENST00000518498 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
TFF3-204ENST00000518498 INE1O15225 51 aa4.3□□□□□ -1.72
TFF3-204ENST00000518498 H3BS24 57 aa4.08□□□□□ -1.76
TFF3-204ENST00000518498 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
TFF3-204ENST00000518498 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
TFF3-204ENST00000518498 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
TFF3-204ENST00000518498 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
TFF3-204ENST00000518498 PRM1P04553 51 aa3.67□□□□□ -1.82
TFF3-204ENST00000518498 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
TFF3-204ENST00000518498 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
TFF3-204ENST00000518498 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
TFF3-204ENST00000518498 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
TFF3-204ENST00000518498 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 64.7 ms