RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
SPIDR-203ENST00000517693 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
SPIDR-203ENST00000517693 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
SPIDR-203ENST00000517693 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
SPIDR-203ENST00000517693 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
SPIDR-203ENST00000517693 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
SPIDR-203ENST00000517693 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
SPIDR-203ENST00000517693 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
SPIDR-203ENST00000517693 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
SPIDR-203ENST00000517693 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.7
SPIDR-203ENST00000517693 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.7
SPIDR-203ENST00000517693 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
SPIDR-203ENST00000517693 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
SPIDR-203ENST00000517693 NEBP20929 6669 aa4.32□□□□□ -1.72
SPIDR-203ENST00000517693 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
SPIDR-203ENST00000517693 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SPIDR-203ENST00000517693 MT1EP04732 61 aa4.25□□□□□ -1.73
SPIDR-203ENST00000517693 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
SPIDR-203ENST00000517693 KMT2DO14686 5537 aa4.21□□□□□ -1.74
SPIDR-203ENST00000517693 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
SPIDR-203ENST00000517693 MT1LQ93083 61 aa4.18□□□□□ -1.74
SPIDR-203ENST00000517693 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
SPIDR-203ENST00000517693 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
SPIDR-203ENST00000517693 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
SPIDR-203ENST00000517693 SPRR2FQ96RM1 72 aa4.11□□□□□ -1.75
SPIDR-203ENST00000517693 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
SPIDR-203ENST00000517693 MT1GP13640 62 aa4.08□□□□□ -1.76
SPIDR-203ENST00000517693 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
SPIDR-203ENST00000517693 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
SPIDR-203ENST00000517693 SPRR2EP22531 72 aa4□□□□□ -1.77
SPIDR-203ENST00000517693 SPRR2BP35325 72 aa4□□□□□ -1.77
SPIDR-203ENST00000517693 SPRR2AP35326 72 aa4□□□□□ -1.77
SPIDR-203ENST00000517693 MT1MQ8N339 61 aa4□□□□□ -1.77
SPIDR-203ENST00000517693 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
SPIDR-203ENST00000517693 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
SPIDR-203ENST00000517693 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
SPIDR-203ENST00000517693 SPRR2DP22532 72 aa3.87□□□□□ -1.79
SPIDR-203ENST00000517693 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
SPIDR-203ENST00000517693 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
SPIDR-203ENST00000517693 INE1O15225 51 aa3.58□□□□□ -1.84
SPIDR-203ENST00000517693 MT1AP04731 61 aa3.58□□□□□ -1.84
SPIDR-203ENST00000517693 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
SPIDR-203ENST00000517693 DSTQ03001 7570 aaKnown RBP3.54□□□□□ -1.84
SPIDR-203ENST00000517693 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
SPIDR-203ENST00000517693 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
SPIDR-203ENST00000517693 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
SPIDR-203ENST00000517693 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
SPIDR-203ENST00000517693 MT4P47944 62 aa3.39□□□□□ -1.87
SPIDR-203ENST00000517693 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
SPIDR-203ENST00000517693 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
SPIDR-203ENST00000517693 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
SPIDR-203ENST00000517693 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
SPIDR-203ENST00000517693 MT3P25713 68 aa3.27□□□□□ -1.89
SPIDR-203ENST00000517693 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
SPIDR-203ENST00000517693 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
SPIDR-203ENST00000517693 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
SPIDR-203ENST00000517693 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SPIDR-203ENST00000517693 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SPIDR-203ENST00000517693 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SPIDR-203ENST00000517693 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
SPIDR-203ENST00000517693 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
SPIDR-203ENST00000517693 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
SPIDR-203ENST00000517693 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SPIDR-203ENST00000517693 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SPIDR-203ENST00000517693 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
SPIDR-203ENST00000517693 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
SPIDR-203ENST00000517693 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SPIDR-203ENST00000517693 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
SPIDR-203ENST00000517693 PRM1P04553 51 aa2.74□□□□□ -1.97
SPIDR-203ENST00000517693 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
SPIDR-203ENST00000517693 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
SPIDR-203ENST00000517693 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
SPIDR-203ENST00000517693 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
SPIDR-203ENST00000517693 PHGR1C9JFL3 82 aa2.02□□□□□ -2.09
SPIDR-203ENST00000517693 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SPIDR-203ENST00000517693 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
SPIDR-203ENST00000517693 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 84 ms