RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
BRIX1-205ENST00000515798 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
BRIX1-205ENST00000515798 M0R2T5 61 aa3.76□□□□□ -1.81
BRIX1-205ENST00000515798 MT1BP07438 61 aa3.76□□□□□ -1.81
BRIX1-205ENST00000515798 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
BRIX1-205ENST00000515798 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
BRIX1-205ENST00000515798 MT1FP04733 61 aa3.71□□□□□ -1.82
BRIX1-205ENST00000515798 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
BRIX1-205ENST00000515798 MT2AP02795 61 aa3.7□□□□□ -1.82
BRIX1-205ENST00000515798 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
BRIX1-205ENST00000515798 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
BRIX1-205ENST00000515798 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
BRIX1-205ENST00000515798 MT1HP80294 61 aa3.58□□□□□ -1.84
BRIX1-205ENST00000515798 USH2AO75445 5202 aa3.54□□□□□ -1.84
BRIX1-205ENST00000515798 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
BRIX1-205ENST00000515798 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
BRIX1-205ENST00000515798 NEBP20929 6669 aa3.46□□□□□ -1.86
BRIX1-205ENST00000515798 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
BRIX1-205ENST00000515798 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
BRIX1-205ENST00000515798 KRTAP9-3Q9BYQ3 159 aa3.43□□□□□ -1.86
BRIX1-205ENST00000515798 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
BRIX1-205ENST00000515798 MT1LQ93083 61 aa3.41□□□□□ -1.86
BRIX1-205ENST00000515798 SYNE2Q8WXH0 6885 aaKnown RBP3.38□□□□□ -1.87
BRIX1-205ENST00000515798 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
BRIX1-205ENST00000515798 MT1EP04732 61 aa3.36□□□□□ -1.87
BRIX1-205ENST00000515798 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
BRIX1-205ENST00000515798 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
BRIX1-205ENST00000515798 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
BRIX1-205ENST00000515798 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
BRIX1-205ENST00000515798 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
BRIX1-205ENST00000515798 PRM1P04553 51 aa3.26□□□□□ -1.89
BRIX1-205ENST00000515798 MT1AP04731 61 aa3.24□□□□□ -1.89
BRIX1-205ENST00000515798 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
BRIX1-205ENST00000515798 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
BRIX1-205ENST00000515798 KMT2DO14686 5537 aa3.18□□□□□ -1.9
BRIX1-205ENST00000515798 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
BRIX1-205ENST00000515798 MT1GP13640 62 aa3.17□□□□□ -1.9
BRIX1-205ENST00000515798 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
BRIX1-205ENST00000515798 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
BRIX1-205ENST00000515798 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
BRIX1-205ENST00000515798 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
BRIX1-205ENST00000515798 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
BRIX1-205ENST00000515798 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
BRIX1-205ENST00000515798 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
BRIX1-205ENST00000515798 MT1MQ8N339 61 aa3.05□□□□□ -1.92
BRIX1-205ENST00000515798 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
BRIX1-205ENST00000515798 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
BRIX1-205ENST00000515798 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
BRIX1-205ENST00000515798 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
BRIX1-205ENST00000515798 SPRR2EP22531 72 aa2.88□□□□□ -1.95
BRIX1-205ENST00000515798 SPRR2BP35325 72 aa2.88□□□□□ -1.95
BRIX1-205ENST00000515798 SPRR2AP35326 72 aa2.88□□□□□ -1.95
BRIX1-205ENST00000515798 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
BRIX1-205ENST00000515798 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
BRIX1-205ENST00000515798 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
BRIX1-205ENST00000515798 SPRR2DP22532 72 aa2.81□□□□□ -1.96
BRIX1-205ENST00000515798 MT3P25713 68 aa2.77□□□□□ -1.97
BRIX1-205ENST00000515798 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
BRIX1-205ENST00000515798 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
BRIX1-205ENST00000515798 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
BRIX1-205ENST00000515798 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
BRIX1-205ENST00000515798 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
BRIX1-205ENST00000515798 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
BRIX1-205ENST00000515798 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
BRIX1-205ENST00000515798 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
BRIX1-205ENST00000515798 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
BRIX1-205ENST00000515798 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
BRIX1-205ENST00000515798 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
BRIX1-205ENST00000515798 MT4P47944 62 aa2.4□□□□□ -2.03
BRIX1-205ENST00000515798 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
BRIX1-205ENST00000515798 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
BRIX1-205ENST00000515798 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
BRIX1-205ENST00000515798 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
BRIX1-205ENST00000515798 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
BRIX1-205ENST00000515798 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
BRIX1-205ENST00000515798 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
BRIX1-205ENST00000515798 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
BRIX1-205ENST00000515798 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 119 ms