RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CAST-244ENST00000515663 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
CAST-244ENST00000515663 PP632Q6XCG6 107 aa3.56□□□□□ -1.84
CAST-244ENST00000515663 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
CAST-244ENST00000515663 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
CAST-244ENST00000515663 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
CAST-244ENST00000515663 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
CAST-244ENST00000515663 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
CAST-244ENST00000515663 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
CAST-244ENST00000515663 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
CAST-244ENST00000515663 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
CAST-244ENST00000515663 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
CAST-244ENST00000515663 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
CAST-244ENST00000515663 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
CAST-244ENST00000515663 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
CAST-244ENST00000515663 NEBP20929 6669 aa3.31□□□□□ -1.88
CAST-244ENST00000515663 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
CAST-244ENST00000515663 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
CAST-244ENST00000515663 INE1O15225 51 aa3.28□□□□□ -1.88
CAST-244ENST00000515663 KRTAP19-5Q3LI72 72 aa3.28□□□□□ -1.88
CAST-244ENST00000515663 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CAST-244ENST00000515663 KRTAP2-2Q9BYT5 123 aa3.26□□□□□ -1.89
CAST-244ENST00000515663 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
CAST-244ENST00000515663 KMT2DO14686 5537 aa3.22□□□□□ -1.89
CAST-244ENST00000515663 MT1EP04732 61 aa3.22□□□□□ -1.89
CAST-244ENST00000515663 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
CAST-244ENST00000515663 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
CAST-244ENST00000515663 MT1LQ93083 61 aa3.16□□□□□ -1.9
CAST-244ENST00000515663 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
CAST-244ENST00000515663 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
CAST-244ENST00000515663 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
CAST-244ENST00000515663 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
CAST-244ENST00000515663 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
CAST-244ENST00000515663 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
CAST-244ENST00000515663 MT1GP13640 62 aa3.09□□□□□ -1.92
CAST-244ENST00000515663 MT3P25713 68 aa3.08□□□□□ -1.92
CAST-244ENST00000515663 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CAST-244ENST00000515663 MT1MQ8N339 61 aa3.03□□□□□ -1.93
CAST-244ENST00000515663 SPRR2EP22531 72 aa3.02□□□□□ -1.93
CAST-244ENST00000515663 SPRR2BP35325 72 aa3.02□□□□□ -1.93
CAST-244ENST00000515663 SPRR2AP35326 72 aa3.02□□□□□ -1.93
CAST-244ENST00000515663 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
CAST-244ENST00000515663 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
CAST-244ENST00000515663 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
CAST-244ENST00000515663 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
CAST-244ENST00000515663 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CAST-244ENST00000515663 SPRR2DP22532 72 aa2.92□□□□□ -1.94
CAST-244ENST00000515663 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CAST-244ENST00000515663 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CAST-244ENST00000515663 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
CAST-244ENST00000515663 MT1AP04731 61 aa2.69□□□□□ -1.98
CAST-244ENST00000515663 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
CAST-244ENST00000515663 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
CAST-244ENST00000515663 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CAST-244ENST00000515663 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
CAST-244ENST00000515663 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
CAST-244ENST00000515663 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
CAST-244ENST00000515663 MT4P47944 62 aa2.56□□□□□ -2
CAST-244ENST00000515663 KRTAP12-4P60329 112 aa2.53□□□□□ -2
CAST-244ENST00000515663 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
CAST-244ENST00000515663 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
CAST-244ENST00000515663 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
CAST-244ENST00000515663 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
CAST-244ENST00000515663 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
CAST-244ENST00000515663 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
CAST-244ENST00000515663 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
CAST-244ENST00000515663 MUC5ACP98088 5654 aa2.31□□□□□ -2.04
CAST-244ENST00000515663 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CAST-244ENST00000515663 PRM1P04553 51 aa2.16□□□□□ -2.06
CAST-244ENST00000515663 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
CAST-244ENST00000515663 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CAST-244ENST00000515663 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
CAST-244ENST00000515663 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CAST-244ENST00000515663 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
CAST-244ENST00000515663 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
CAST-244ENST00000515663 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
CAST-244ENST00000515663 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 115.7 ms