RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 C7orf65Q6ZTY9 151 aa1.79□□□□□ -2.12
HERC6-208ENST00000515365 KTN1-AS1Q86SY8 53 aa1.79□□□□□ -2.12
HERC6-208ENST00000515365 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
HERC6-208ENST00000515365 PRO2289Q9P1D8 64 aa1.79□□□□□ -2.12
HERC6-208ENST00000515365 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
HERC6-208ENST00000515365 A0A1B0GU69 56 aa1.78□□□□□ -2.12
HERC6-208ENST00000515365 MT1HL1P0DM35 61 aa1.77□□□□□ -2.13
HERC6-208ENST00000515365 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
HERC6-208ENST00000515365 SPINK7P58062 85 aa1.76□□□□□ -2.13
HERC6-208ENST00000515365 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
HERC6-208ENST00000515365 KRTAP5-4Q6L8H1 288 aa1.76□□□□□ -2.13
HERC6-208ENST00000515365 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
HERC6-208ENST00000515365 COX6B2Q6YFQ2 88 aa1.74□□□□□ -2.13
HERC6-208ENST00000515365 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
HERC6-208ENST00000515365 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
HERC6-208ENST00000515365 RETNLBQ9BQ08 111 aa1.72□□□□□ -2.13
HERC6-208ENST00000515365 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
HERC6-208ENST00000515365 RPL37P61927 97 aaKnown RBP1.7□□□□□ -2.14
HERC6-208ENST00000515365 H0YAA0 97 aa1.69□□□□□ -2.14
HERC6-208ENST00000515365 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
HERC6-208ENST00000515365 H1FX-AS1Q4G0G2 97 aa1.68□□□□□ -2.14
HERC6-208ENST00000515365 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
HERC6-208ENST00000515365 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
HERC6-208ENST00000515365 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
HERC6-208ENST00000515365 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
HERC6-208ENST00000515365 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
HERC6-208ENST00000515365 LINC01554Q52M75 96 aa1.66□□□□□ -2.14
HERC6-208ENST00000515365 M0QZ58 72 aa1.65□□□□□ -2.15
HERC6-208ENST00000515365 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
HERC6-208ENST00000515365 CSAG1Q6PB30 78 aa1.63□□□□□ -2.15
HERC6-208ENST00000515365 ROMO1P60602 79 aa1.61□□□□□ -2.15
HERC6-208ENST00000515365 S4R3F8 94 aa1.61□□□□□ -2.15
HERC6-208ENST00000515365 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
HERC6-208ENST00000515365 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.15
HERC6-208ENST00000515365 MT1HP80294 61 aa1.58□□□□□ -2.16
HERC6-208ENST00000515365 CRIPTQ9P021 101 aa1.57□□□□□ -2.16
HERC6-208ENST00000515365 SPRR2EP22531 72 aa1.55□□□□□ -2.16
HERC6-208ENST00000515365 SPRR2BP35325 72 aa1.55□□□□□ -2.16
HERC6-208ENST00000515365 SPRR2AP35326 72 aa1.55□□□□□ -2.16
HERC6-208ENST00000515365 KRTAP19-2Q3LHN2 52 aa1.54□□□□□ -2.16
HERC6-208ENST00000515365 FLGP20930 4061 aaPredicted RBP1.52□□□□□ -2.17
HERC6-208ENST00000515365 M0R2T5 61 aa1.51□□□□□ -2.17
HERC6-208ENST00000515365 SPRR2DP22532 72 aa1.5□□□□□ -2.17
HERC6-208ENST00000515365 A0A0D9SG42 100 aa1.49□□□□□ -2.17
HERC6-208ENST00000515365 KRTAP4-1Q9BYQ7 146 aa1.48□□□□□ -2.17
HERC6-208ENST00000515365 SPRR2GQ9BYE4 73 aa1.46□□□□□ -2.18
HERC6-208ENST00000515365 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
HERC6-208ENST00000515365 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
HERC6-208ENST00000515365 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
HERC6-208ENST00000515365 TNP1P09430 55 aa1.42□□□□□ -2.18
HERC6-208ENST00000515365 MT4P47944 62 aa1.4□□□□□ -2.19
HERC6-208ENST00000515365 KRTAP19-8Q3LI54 63 aa1.4□□□□□ -2.19
HERC6-208ENST00000515365 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
HERC6-208ENST00000515365 KRTAP8-1Q8IUC2 63 aa1.36□□□□□ -2.19
HERC6-208ENST00000515365 MT2AP02795 61 aa1.33□□□□□ -2.2
HERC6-208ENST00000515365 INE1O15225 51 aa1.32□□□□□ -2.2
HERC6-208ENST00000515365 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
HERC6-208ENST00000515365 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
HERC6-208ENST00000515365 MT1FP04733 61 aa1.31□□□□□ -2.2
HERC6-208ENST00000515365 MT1BP07438 61 aa1.3□□□□□ -2.2
HERC6-208ENST00000515365 MT1XP80297 61 aa1.29□□□□□ -2.2
HERC6-208ENST00000515365 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
HERC6-208ENST00000515365 SYNE1Q8NF91 8797 aaKnown RBP1.18□□□□□ -2.22
HERC6-208ENST00000515365 MT1EP04732 61 aa1.16□□□□□ -2.22
HERC6-208ENST00000515365 KRTAP19-5Q3LI72 72 aa1.16□□□□□ -2.22
HERC6-208ENST00000515365 KRTAP19-7Q3SYF9 63 aa1.16□□□□□ -2.22
HERC6-208ENST00000515365 MT1LQ93083 61 aa1.14□□□□□ -2.23
HERC6-208ENST00000515365 MT1GP13640 62 aa1.12□□□□□ -2.23
HERC6-208ENST00000515365 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
HERC6-208ENST00000515365 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
HERC6-208ENST00000515365 KRTAP19-3Q7Z4W3 81 aa1.07□□□□□ -2.24
HERC6-208ENST00000515365 MT1MQ8N339 61 aa1.05□□□□□ -2.24
HERC6-208ENST00000515365 MT1AP04731 61 aa1.04□□□□□ -2.24
HERC6-208ENST00000515365 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
HERC6-208ENST00000515365 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
HERC6-208ENST00000515365 KRTAP6-2Q3LI66 62 aa0.81□□□□□ -2.28
HERC6-208ENST00000515365 PRM1P04553 51 aa0.8□□□□□ -2.28
HERC6-208ENST00000515365 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 38.9 ms