RNA–Protein interactions for RNA: ENST00000515090.5

GPM6A-221, Transcript of glycoprotein M6A, human

TSL 2 BASIC

Gene GPM6A, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPM6A-221	ENST00000515090	MT1B	P07438	61 aa		3.62	□□□□□ -1.83
GPM6A-221	ENST00000515090	KRTAP9-6	A8MVA2	160 aa		3.61	□□□□□ -1.83
GPM6A-221	ENST00000515090	KRTAP6-3	Q3LI67	103 aa		3.61	□□□□□ -1.83
GPM6A-221	ENST00000515090	KRTAP25-1	Q3LHN0	102 aa		3.6	□□□□□ -1.83
GPM6A-221	ENST00000515090	MUC12	Q9UKN1	5478 aa		3.6	□□□□□ -1.83
GPM6A-221	ENST00000515090	PRAC1	Q96KF2	57 aa		3.6	□□□□□ -1.83
GPM6A-221	ENST00000515090	SPINT4	Q6UDR6	99 aa		3.59	□□□□□ -1.84
GPM6A-221	ENST00000515090	KRTAP19-8	Q3LI54	63 aa		3.55	□□□□□ -1.84
GPM6A-221	ENST00000515090	LINC01554	Q52M75	96 aa		3.55	□□□□□ -1.84
GPM6A-221	ENST00000515090	SPRR2G	Q9BYE4	73 aa		3.55	□□□□□ -1.84
GPM6A-221	ENST00000515090	OBSCN	Q5VST9	7968 aa		3.52	□□□□□ -1.85
GPM6A-221	ENST00000515090	NEB	P20929	6669 aa		3.5	□□□□□ -1.85
GPM6A-221	ENST00000515090	KMT2D	O14686	5537 aa		3.5	□□□□□ -1.85
GPM6A-221	ENST00000515090	MDN1	Q9NU22	5596 aa		3.46	□□□□□ -1.86
GPM6A-221	ENST00000515090	CAMK2N1	Q7Z7J9	78 aa		3.45	□□□□□ -1.86
GPM6A-221	ENST00000515090	PP632	Q6XCG6	107 aa		3.44	□□□□□ -1.86
GPM6A-221	ENST00000515090	C10orf95	Q9H7T3	257 aa		3.44	□□□□□ -1.86
GPM6A-221	ENST00000515090	PLAC4	Q8WY50	150 aa		3.43	□□□□□ -1.86
GPM6A-221	ENST00000515090	KRTAP4-3	Q9BYR4	195 aa		3.42	□□□□□ -1.86
GPM6A-221	ENST00000515090	KRTAP10-12	P60413	245 aa		3.39	□□□□□ -1.87
GPM6A-221	ENST00000515090	TNP1	P09430	55 aa		3.38	□□□□□ -1.87
GPM6A-221	ENST00000515090	MT1X	P80297	61 aa		3.37	□□□□□ -1.87
GPM6A-221	ENST00000515090	KRTAP20-1	Q3LI63	56 aa		3.37	□□□□□ -1.87
GPM6A-221	ENST00000515090	KRTAP5-2	Q701N4	177 aa		3.32	□□□□□ -1.88
GPM6A-221	ENST00000515090	SPRR2F	Q96RM1	72 aa		3.31	□□□□□ -1.88
GPM6A-221	ENST00000515090	SPRR2E	P22531	72 aa		3.27	□□□□□ -1.89
GPM6A-221	ENST00000515090	SPRR2B	P35325	72 aa		3.27	□□□□□ -1.89
GPM6A-221	ENST00000515090	SPRR2A	P35326	72 aa		3.27	□□□□□ -1.89
GPM6A-221	ENST00000515090	KRTAP2-3	P0C7H8	128 aa		3.26	□□□□□ -1.89
GPM6A-221	ENST00000515090	LCE1F	Q5T754	118 aa		3.26	□□□□□ -1.89
GPM6A-221	ENST00000515090	KRTAP2-4	Q9BYR9	128 aa		3.26	□□□□□ -1.89
GPM6A-221	ENST00000515090	PRO2289	Q9P1D8	64 aa		3.26	□□□□□ -1.89
GPM6A-221	ENST00000515090	KRTAP8-1	Q8IUC2	63 aa		3.24	□□□□□ -1.89
GPM6A-221	ENST00000515090	SPRR2D	P22532	72 aa		3.15	□□□□□ -1.9
GPM6A-221	ENST00000515090	KRTAP2-1	Q9BYU5	128 aa		3.15	□□□□□ -1.9
GPM6A-221	ENST00000515090	LCE3C	Q5T5A8	94 aa		3.13	□□□□□ -1.91
GPM6A-221	ENST00000515090	LCE3A	Q5TA76	89 aa		3.12	□□□□□ -1.91
GPM6A-221	ENST00000515090	SPRR5	A0A1B0GTR4	108 aa		3.09	□□□□□ -1.91
GPM6A-221	ENST00000515090	DST	Q03001	7570 aa	Known RBP	3.06	□□□□□ -1.92
GPM6A-221	ENST00000515090	KRTAP12-3	P60328	96 aa		3.03	□□□□□ -1.92
GPM6A-221	ENST00000515090	LUZP6	Q538Z0	58 aa		3.03	□□□□□ -1.92
GPM6A-221	ENST00000515090	KRTAP19-7	Q3SYF9	63 aa		3.02	□□□□□ -1.93
GPM6A-221	ENST00000515090	NDUFAF8	A1L188	74 aa		3	□□□□□ -1.93
GPM6A-221	ENST00000515090	MT1E	P04732	61 aa		2.98	□□□□□ -1.93
GPM6A-221	ENST00000515090	KRTAP19-3	Q7Z4W3	81 aa		2.94	□□□□□ -1.94
GPM6A-221	ENST00000515090	KRTAP19-5	Q3LI72	72 aa		2.92	□□□□□ -1.94
GPM6A-221	ENST00000515090	GPR98	Q8WXG9	6306 aa		2.86	□□□□□ -1.95
GPM6A-221	ENST00000515090	MT1G	P13640	62 aa		2.84	□□□□□ -1.95
GPM6A-221	ENST00000515090	LCE3E	Q5T5B0	92 aa		2.84	□□□□□ -1.95
GPM6A-221	ENST00000515090	MT1M	Q8N339	61 aa		2.83	□□□□□ -1.96
GPM6A-221	ENST00000515090	MT1L	Q93083	61 aa		2.83	□□□□□ -1.96
GPM6A-221	ENST00000515090	MT4	P47944	62 aa		2.81	□□□□□ -1.96
GPM6A-221	ENST00000515090	HMCN1	Q96RW7	5635 aa		2.81	□□□□□ -1.96
GPM6A-221	ENST00000515090	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.8	□□□□□ -1.96
GPM6A-221	ENST00000515090	KRTAP5-8	O75690	187 aa		2.78	□□□□□ -1.96
GPM6A-221	ENST00000515090	AHNAK2	Q8IVF2	5795 aa		2.75	□□□□□ -1.97
GPM6A-221	ENST00000515090	LCE1C	Q5T751	118 aa		2.71	□□□□□ -1.98
GPM6A-221	ENST00000515090	LCE1B	Q5T7P3	118 aa		2.71	□□□□□ -1.98
GPM6A-221	ENST00000515090	KRTAP5-10	Q6L8G5	202 aa		2.68	□□□□□ -1.98
GPM6A-221	ENST00000515090	INE1	O15225	51 aa		2.61	□□□□□ -1.99
GPM6A-221	ENST00000515090	SYNE1	Q8NF91	8797 aa	Known RBP	2.6	□□□□□ -1.99
GPM6A-221	ENST00000515090	KRTAP20-2	Q3LI61	65 aa		2.6	□□□□□ -1.99
GPM6A-221	ENST00000515090	KRTAP5-7	Q6L8G8	165 aa		2.55	□□□□□ -2
GPM6A-221	ENST00000515090	KRTAP12-4	P60329	112 aa		2.49	□□□□□ -2.01
GPM6A-221	ENST00000515090	KRTAP6-1	Q3LI64	71 aa		2.42	□□□□□ -2.02
GPM6A-221	ENST00000515090	MT1A	P04731	61 aa		2.41	□□□□□ -2.02
GPM6A-221	ENST00000515090	KRTAP6-2	Q3LI66	62 aa		2.32	□□□□□ -2.04
GPM6A-221	ENST00000515090	MUC19	Q7Z5P9	8384 aa		2.28	□□□□□ -2.04
GPM6A-221	ENST00000515090	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.26	□□□□□ -2.05
GPM6A-221	ENST00000515090	AHNAK	Q09666	5890 aa	Known RBP	2.23	□□□□□ -2.05
GPM6A-221	ENST00000515090	MUC5AC	P98088	5654 aa		2.22	□□□□□ -2.05
GPM6A-221	ENST00000515090	LCE3D	Q9BYE3	92 aa		2.17	□□□□□ -2.06
GPM6A-221	ENST00000515090	KRTAP21-2	Q3LI59	83 aa		1.97	□□□□□ -2.09
GPM6A-221	ENST00000515090	PRM1	P04553	51 aa		1.87	□□□□□ -2.11
GPM6A-221	ENST00000515090	PHGR1	C9JFL3	82 aa		1.54	□□□□□ -2.16
GPM6A-221	ENST00000515090	KRTAP21-1	Q3LI58	79 aa		1.24	□□□□□ -2.21
GPM6A-221	ENST00000515090	MUC16	Q8WXI7	14507 aa		1.01	□□□□□ -2.25

Retrieved 77 of 20,778 RNA–protein pairs in 40.8 ms