RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 NEBP20929 6669 aa7.16□□□□□ -1.26
SSBP2-218ENST00000514493 MT1LQ93083 61 aa7.04□□□□□ -1.28
SSBP2-218ENST00000514493 SPRR2EP22531 72 aa7.03□□□□□ -1.28
SSBP2-218ENST00000514493 SPRR2BP35325 72 aa7.03□□□□□ -1.28
SSBP2-218ENST00000514493 SPRR2AP35326 72 aa7.03□□□□□ -1.28
SSBP2-218ENST00000514493 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
SSBP2-218ENST00000514493 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
SSBP2-218ENST00000514493 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
SSBP2-218ENST00000514493 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
SSBP2-218ENST00000514493 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
SSBP2-218ENST00000514493 MT1GP13640 62 aa6.87□□□□□ -1.31
SSBP2-218ENST00000514493 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
SSBP2-218ENST00000514493 MT1MQ8N339 61 aa6.8□□□□□ -1.32
SSBP2-218ENST00000514493 SPRR2DP22532 72 aa6.77□□□□□ -1.33
SSBP2-218ENST00000514493 KRTAP20-1Q3LI63 56 aa6.76□□□□□ -1.33
SSBP2-218ENST00000514493 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
SSBP2-218ENST00000514493 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
SSBP2-218ENST00000514493 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
SSBP2-218ENST00000514493 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
SSBP2-218ENST00000514493 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
SSBP2-218ENST00000514493 DSTQ03001 7570 aaKnown RBP6.58□□□□□ -1.36
SSBP2-218ENST00000514493 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
SSBP2-218ENST00000514493 NDUFAF8A1L188 74 aa6.52□□□□□ -1.37
SSBP2-218ENST00000514493 KRTAP9-6A8MVA2 160 aa6.52□□□□□ -1.37
SSBP2-218ENST00000514493 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
SSBP2-218ENST00000514493 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
SSBP2-218ENST00000514493 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
SSBP2-218ENST00000514493 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
SSBP2-218ENST00000514493 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
SSBP2-218ENST00000514493 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
SSBP2-218ENST00000514493 MT1AP04731 61 aa5.99□□□□□ -1.45
SSBP2-218ENST00000514493 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
SSBP2-218ENST00000514493 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
SSBP2-218ENST00000514493 MT4P47944 62 aa5.95□□□□□ -1.46
SSBP2-218ENST00000514493 LCE1DQ5T752 114 aa5.95□□□□□ -1.46
SSBP2-218ENST00000514493 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
SSBP2-218ENST00000514493 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SSBP2-218ENST00000514493 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
SSBP2-218ENST00000514493 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
SSBP2-218ENST00000514493 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
SSBP2-218ENST00000514493 H3BS24 57 aa5.7□□□□□ -1.5
SSBP2-218ENST00000514493 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
SSBP2-218ENST00000514493 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
SSBP2-218ENST00000514493 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
SSBP2-218ENST00000514493 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
SSBP2-218ENST00000514493 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
SSBP2-218ENST00000514493 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
SSBP2-218ENST00000514493 MT3P25713 68 aa5.42□□□□□ -1.54
SSBP2-218ENST00000514493 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
SSBP2-218ENST00000514493 INE1O15225 51 aa5.38□□□□□ -1.55
SSBP2-218ENST00000514493 KRTAP5-10Q6L8G5 202 aa5.3□□□□□ -1.56
SSBP2-218ENST00000514493 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
SSBP2-218ENST00000514493 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
SSBP2-218ENST00000514493 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
SSBP2-218ENST00000514493 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
SSBP2-218ENST00000514493 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
SSBP2-218ENST00000514493 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
SSBP2-218ENST00000514493 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SSBP2-218ENST00000514493 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
SSBP2-218ENST00000514493 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
SSBP2-218ENST00000514493 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
SSBP2-218ENST00000514493 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
SSBP2-218ENST00000514493 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
SSBP2-218ENST00000514493 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
SSBP2-218ENST00000514493 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
SSBP2-218ENST00000514493 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
SSBP2-218ENST00000514493 PRM1P04553 51 aa4.39□□□□□ -1.71
SSBP2-218ENST00000514493 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
SSBP2-218ENST00000514493 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
SSBP2-218ENST00000514493 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
SSBP2-218ENST00000514493 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
SSBP2-218ENST00000514493 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
SSBP2-218ENST00000514493 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
SSBP2-218ENST00000514493 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
SSBP2-218ENST00000514493 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
SSBP2-218ENST00000514493 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
SSBP2-218ENST00000514493 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 73.1 ms