RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 VPS13CQ709C8 3753 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 DNAH5Q8TE73 4624 aa-0.13□□□□□ -2.43
MATR3-223ENST00000514402 H3BUX3 64 aa-0.14□□□□□ -2.43
MATR3-223ENST00000514402 K7EIM0 57 aa-0.14□□□□□ -2.43
MATR3-223ENST00000514402 RHPN1-AS1Q9BWJ2 59 aa-0.14□□□□□ -2.43
MATR3-223ENST00000514402 SMG1Q96Q15 3661 aaKnown RBP-0.14□□□□□ -2.43
MATR3-223ENST00000514402 MACF1Q9UPN3 7388 aaKnown RBP-0.14□□□□□ -2.43
MATR3-223ENST00000514402 ITPR2Q14571 2701 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 KIAA1109Q2LD37 5005 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 SPTAN1Q13813 2472 aaKnown RBP-0.15□□□□□ -2.43
MATR3-223ENST00000514402 DOPEY1Q5JWR5 2465 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 MT1GP13640 62 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 PRCDQ00LT1 54 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 KRTAP20-2Q3LI61 65 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 MUC3AQ02505 3323 aa-0.15□□□□□ -2.43
MATR3-223ENST00000514402 CEP295Q9C0D2 2601 aa-0.16□□□□□ -2.43
MATR3-223ENST00000514402 MYO9AB2RTY4 2548 aa-0.16□□□□□ -2.43
MATR3-223ENST00000514402 FREM2Q5SZK8 3169 aa-0.16□□□□□ -2.43
MATR3-223ENST00000514402 MYO15AQ9UKN7 3530 aa-0.16□□□□□ -2.43
MATR3-223ENST00000514402 MT1BP07438 61 aa-0.16□□□□□ -2.44
MATR3-223ENST00000514402 WDFY4Q6ZS81 3184 aa-0.16□□□□□ -2.44
MATR3-223ENST00000514402 CEP250Q9BV73 2442 aa-0.16□□□□□ -2.44
MATR3-223ENST00000514402 DNAH12Q6ZR08 3092 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 PCNTO95613 3336 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 RYR2Q92736 4967 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 HYDINQ4G0P3 5121 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 ARHGAP5-AS1Q96IT6 56 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 SZT2Q5T011 3432 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 TLN1Q9Y490 2541 aaKnown RBP-0.17□□□□□ -2.44
MATR3-223ENST00000514402 RYR3Q15413 4870 aa-0.17□□□□□ -2.44
MATR3-223ENST00000514402 DEFB4AO15263 64 aa-0.18□□□□□ -2.44
MATR3-223ENST00000514402 MKI67P46013 3256 aaKnown RBP-0.18□□□□□ -2.44
MATR3-223ENST00000514402 DMDP11532 3685 aa-0.19□□□□□ -2.44
MATR3-223ENST00000514402 LOC400499M0QZD8 3231 aa-0.19□□□□□ -2.44
MATR3-223ENST00000514402 MT1FP04733 61 aa-0.19□□□□□ -2.44
MATR3-223ENST00000514402 DEFB133Q30KQ1 61 aa-0.19□□□□□ -2.44
MATR3-223ENST00000514402 TMEM167AQ8TBQ9 72 aa-0.19□□□□□ -2.44
MATR3-223ENST00000514402 BOD1L1Q8NFC6 3051 aa-0.19□□□□□ -2.44
MATR3-223ENST00000514402 CEP350Q5VT06 3117 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 DCHS1Q96JQ0 3298 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 WDFY3Q8IZQ1 3526 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 CD52P31358 61 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 EP400Q96L91 3159 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 XIRP2A4UGR9 3374 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 NEBP20929 6669 aa-0.2□□□□□ -2.44
MATR3-223ENST00000514402 CENPEQ02224 2701 aa-0.22□□□□□ -2.45
MATR3-223ENST00000514402 SPEGQ15772 3267 aa-0.23□□□□□ -2.45
MATR3-223ENST00000514402 HTN1P15515 57 aa-0.23□□□□□ -2.45
MATR3-223ENST00000514402 LINC01556Q5JQF7 62 aa-0.23□□□□□ -2.45
MATR3-223ENST00000514402 Q9Y3F1 56 aa-0.23□□□□□ -2.45
MATR3-223ENST00000514402 ABCA13Q86UQ4 5058 aa-0.23□□□□□ -2.45
MATR3-223ENST00000514402 A0A096LNI7 61 aa-0.24□□□□□ -2.45
MATR3-223ENST00000514402 KRTAP19-2Q3LHN2 52 aa-0.24□□□□□ -2.45
MATR3-223ENST00000514402 KRTAP20-1Q3LI63 56 aa-0.24□□□□□ -2.45
MATR3-223ENST00000514402 CFAP47Q6ZTR5 3102 aa-0.24□□□□□ -2.45
MATR3-223ENST00000514402 USP34Q70CQ2 3546 aa-0.25□□□□□ -2.45
MATR3-223ENST00000514402 RPL39P5Q59GN2 51 aa-0.26□□□□□ -2.45
MATR3-223ENST00000514402 DEFB104AQ8WTQ1 72 aa-0.26□□□□□ -2.45
MATR3-223ENST00000514402 UNC80Q8N2C7 3258 aa-0.26□□□□□ -2.45
MATR3-223ENST00000514402 ASPMQ8IZT6 3477 aa-0.26□□□□□ -2.45
MATR3-223ENST00000514402 BRCA2P51587 3418 aa-0.27□□□□□ -2.45
MATR3-223ENST00000514402 A0A096LPF7 62 aa-0.27□□□□□ -2.45
MATR3-223ENST00000514402 TTTY10Q9BZA0 68 aa-0.27□□□□□ -2.45
MATR3-223ENST00000514402 VCANP13611 3396 aa-0.28□□□□□ -2.45
MATR3-223ENST00000514402 VPS13AQ96RL7 3174 aa-0.3□□□□□ -2.46
MATR3-223ENST00000514402 H3BSH0 61 aa-0.3□□□□□ -2.46
MATR3-223ENST00000514402 KRTAP19-6Q3LI70 58 aa-0.3□□□□□ -2.46
MATR3-223ENST00000514402 CENPFP49454 3210 aa-0.31□□□□□ -2.46
MATR3-223ENST00000514402 CDH23Q9H251 3354 aa-0.31□□□□□ -2.46
MATR3-223ENST00000514402 DEFB108AA8MXU0 73 aa-0.31□□□□□ -2.46
MATR3-223ENST00000514402 UTRNP46939 3433 aa-0.32□□□□□ -2.46
MATR3-223ENST00000514402 GOLGB1Q14789 3259 aaKnown RBP-0.32□□□□□ -2.46
MATR3-223ENST00000514402 COX14Q96I36 57 aa-0.32□□□□□ -2.46
MATR3-223ENST00000514402 DNAH14Q0VDD8 3507 aa-0.34□□□□□ -2.46
MATR3-223ENST00000514402 APELAP0DMC3 54 aa-0.34□□□□□ -2.46
MATR3-223ENST00000514402 HTN3P15516 51 aa-0.4□□□□□ -2.47
MATR3-223ENST00000514402 DEFB108BQ8NET1 73 aa-0.4□□□□□ -2.47
MATR3-223ENST00000514402 STATHP02808 62 aa-0.47□□□□□ -2.48
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms