RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
CCL28-203ENST00000513525 ROMO1P60602 79 aa4.31□□□□□ -1.72
CCL28-203ENST00000513525 SPINT4Q6UDR6 99 aa4.3□□□□□ -1.72
CCL28-203ENST00000513525 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
CCL28-203ENST00000513525 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
CCL28-203ENST00000513525 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
CCL28-203ENST00000513525 NEBP20929 6669 aa4.25□□□□□ -1.73
CCL28-203ENST00000513525 MT3P25713 68 aa4.25□□□□□ -1.73
CCL28-203ENST00000513525 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
CCL28-203ENST00000513525 KMT2DO14686 5537 aa4.17□□□□□ -1.74
CCL28-203ENST00000513525 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
CCL28-203ENST00000513525 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
CCL28-203ENST00000513525 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
CCL28-203ENST00000513525 MT1XP80297 61 aa4.12□□□□□ -1.75
CCL28-203ENST00000513525 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
CCL28-203ENST00000513525 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
CCL28-203ENST00000513525 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
CCL28-203ENST00000513525 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
CCL28-203ENST00000513525 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
CCL28-203ENST00000513525 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
CCL28-203ENST00000513525 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
CCL28-203ENST00000513525 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
CCL28-203ENST00000513525 SPRR2EP22531 72 aa4.02□□□□□ -1.77
CCL28-203ENST00000513525 SPRR2BP35325 72 aa4.02□□□□□ -1.77
CCL28-203ENST00000513525 SPRR2AP35326 72 aa4.02□□□□□ -1.77
CCL28-203ENST00000513525 A0A0A0MQY5 61 aa4□□□□□ -1.77
CCL28-203ENST00000513525 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
CCL28-203ENST00000513525 TNP1P09430 55 aa3.96□□□□□ -1.78
CCL28-203ENST00000513525 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
CCL28-203ENST00000513525 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
CCL28-203ENST00000513525 KRTAP2-1Q9BYU5 128 aa3.9□□□□□ -1.79
CCL28-203ENST00000513525 SPRR2DP22532 72 aa3.89□□□□□ -1.79
CCL28-203ENST00000513525 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
CCL28-203ENST00000513525 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CCL28-203ENST00000513525 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
CCL28-203ENST00000513525 MT1EP04732 61 aa3.66□□□□□ -1.82
CCL28-203ENST00000513525 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
CCL28-203ENST00000513525 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
CCL28-203ENST00000513525 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
CCL28-203ENST00000513525 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
CCL28-203ENST00000513525 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
CCL28-203ENST00000513525 MT1GP13640 62 aa3.56□□□□□ -1.84
CCL28-203ENST00000513525 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
CCL28-203ENST00000513525 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
CCL28-203ENST00000513525 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
CCL28-203ENST00000513525 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CCL28-203ENST00000513525 MT1MQ8N339 61 aa3.49□□□□□ -1.85
CCL28-203ENST00000513525 MT1LQ93083 61 aa3.49□□□□□ -1.85
CCL28-203ENST00000513525 GPR98Q8WXG9 6306 aa3.44□□□□□ -1.86
CCL28-203ENST00000513525 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
CCL28-203ENST00000513525 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
CCL28-203ENST00000513525 MT4P47944 62 aa3.39□□□□□ -1.87
CCL28-203ENST00000513525 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
CCL28-203ENST00000513525 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
CCL28-203ENST00000513525 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
CCL28-203ENST00000513525 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
CCL28-203ENST00000513525 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
CCL28-203ENST00000513525 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
CCL28-203ENST00000513525 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
CCL28-203ENST00000513525 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
CCL28-203ENST00000513525 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.92
CCL28-203ENST00000513525 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CCL28-203ENST00000513525 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CCL28-203ENST00000513525 MT1AP04731 61 aa2.98□□□□□ -1.93
CCL28-203ENST00000513525 INE1O15225 51 aa2.95□□□□□ -1.94
CCL28-203ENST00000513525 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
CCL28-203ENST00000513525 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
CCL28-203ENST00000513525 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
CCL28-203ENST00000513525 MUC5ACP98088 5654 aa2.71□□□□□ -1.97
CCL28-203ENST00000513525 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
CCL28-203ENST00000513525 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
CCL28-203ENST00000513525 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
CCL28-203ENST00000513525 PRM1P04553 51 aa2.23□□□□□ -2.05
CCL28-203ENST00000513525 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
CCL28-203ENST00000513525 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
CCL28-203ENST00000513525 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CCL28-203ENST00000513525 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 81.8 ms