RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ATXN8Q156A1 80 aa1.62□□□□□ -2.15
HTT-211ENST00000513326 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
HTT-211ENST00000513326 A0A1W2PPM0 123 aa1.61□□□□□ -2.15
HTT-211ENST00000513326 TSTD3H0UI37 97 aa1.6□□□□□ -2.15
HTT-211ENST00000513326 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
HTT-211ENST00000513326 BATFQ16520 125 aa1.59□□□□□ -2.15
HTT-211ENST00000513326 H3BT86 120 aa1.58□□□□□ -2.16
HTT-211ENST00000513326 C20orf197Q8N268 126 aa1.58□□□□□ -2.16
HTT-211ENST00000513326 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
HTT-211ENST00000513326 TRAV22A0A0B4J277 110 aa1.57□□□□□ -2.16
HTT-211ENST00000513326 A0A0D9SG42 100 aa1.57□□□□□ -2.16
HTT-211ENST00000513326 TP53AIP1Q9HCN2 124 aa1.57□□□□□ -2.16
HTT-211ENST00000513326 LOC101927531A0A1B0GV80 90 aa1.56□□□□□ -2.16
HTT-211ENST00000513326 H3BPC8 53 aa1.56□□□□□ -2.16
HTT-211ENST00000513326 MT-ATP8P03928 68 aa1.56□□□□□ -2.16
HTT-211ENST00000513326 ACYP1P07311 99 aa1.56□□□□□ -2.16
HTT-211ENST00000513326 KRTAP12-4P60329 112 aa1.56□□□□□ -2.16
HTT-211ENST00000513326 SPCS1Q9Y6A9 102 aa1.55□□□□□ -2.16
HTT-211ENST00000513326 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
HTT-211ENST00000513326 LOC105371267A0A1B0GV96 52 aa1.52□□□□□ -2.17
HTT-211ENST00000513326 TAX1BP3O14907 124 aa1.52□□□□□ -2.17
HTT-211ENST00000513326 COL5A1-AS1Q5SY13 56 aa1.52□□□□□ -2.17
HTT-211ENST00000513326 UBL5Q9BZL1 73 aa1.52□□□□□ -2.17
HTT-211ENST00000513326 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
HTT-211ENST00000513326 H0Y9P7 68 aa1.51□□□□□ -2.17
HTT-211ENST00000513326 GTF2H5Q6ZYL4 71 aa1.51□□□□□ -2.17
HTT-211ENST00000513326 F8W1H4 67 aa1.5□□□□□ -2.17
HTT-211ENST00000513326 ATP5EP2Q5VTU8 51 aa1.5□□□□□ -2.17
HTT-211ENST00000513326 ATOX1O00244 68 aa1.46□□□□□ -2.18
HTT-211ENST00000513326 TMEM258P61165 79 aa1.46□□□□□ -2.18
HTT-211ENST00000513326 DMAC1Q96GE9 116 aa1.46□□□□□ -2.18
HTT-211ENST00000513326 UQCRQO14949 82 aa1.45□□□□□ -2.18
HTT-211ENST00000513326 KRTAP12-1P59990 96 aa1.45□□□□□ -2.18
HTT-211ENST00000513326 ETDBQ3ZM63 59 aa1.45□□□□□ -2.18
HTT-211ENST00000513326 LINC00208Q96KT6 92 aa1.45□□□□□ -2.18
HTT-211ENST00000513326 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
HTT-211ENST00000513326 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
HTT-211ENST00000513326 J3QR89 54 aa1.42□□□□□ -2.18
HTT-211ENST00000513326 HIST1H4AP62805 103 aaKnown RBP1.42□□□□□ -2.18
HTT-211ENST00000513326 KRTAP6-2Q3LI66 62 aa1.42□□□□□ -2.18
HTT-211ENST00000513326 LINC00643Q86TS7 51 aa1.42□□□□□ -2.18
HTT-211ENST00000513326 KTN1-AS1Q86SY8 53 aa1.41□□□□□ -2.18
HTT-211ENST00000513326 TRAV7A0A075B6U4 112 aa1.39□□□□□ -2.19
HTT-211ENST00000513326 PMAIP1Q13794 54 aa1.39□□□□□ -2.19
HTT-211ENST00000513326 MT1AP04731 61 aa1.38□□□□□ -2.19
HTT-211ENST00000513326 SMIM20Q8N5G0 67 aa1.38□□□□□ -2.19
HTT-211ENST00000513326 COA5Q86WW8 74 aa1.37□□□□□ -2.19
HTT-211ENST00000513326 SPATA8Q6RVD6 105 aa1.36□□□□□ -2.19
HTT-211ENST00000513326 A0A1B0GV90 55 aa1.35□□□□□ -2.19
HTT-211ENST00000513326 K7ERU9 68 aa1.35□□□□□ -2.19
HTT-211ENST00000513326 SCGB1A1P11684 91 aa1.34□□□□□ -2.19
HTT-211ENST00000513326 SPTSSBQ8NFR3 76 aa1.34□□□□□ -2.19
HTT-211ENST00000513326 ACYP2P14621 99 aa1.32□□□□□ -2.2
HTT-211ENST00000513326 TNP1P09430 55 aa1.31□□□□□ -2.2
HTT-211ENST00000513326 CHKB-CPT1BH3BT56 60 aa1.29□□□□□ -2.2
HTT-211ENST00000513326 Q1T7F1 81 aa1.29□□□□□ -2.2
HTT-211ENST00000513326 SERP2Q8N6R1 65 aa1.29□□□□□ -2.2
HTT-211ENST00000513326 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
HTT-211ENST00000513326 COX7CP15954 63 aa1.23□□□□□ -2.21
HTT-211ENST00000513326 ATP5EP56381 51 aaPredicted RBP1.23□□□□□ -2.21
HTT-211ENST00000513326 SNURFQ9Y675 71 aa1.23□□□□□ -2.21
HTT-211ENST00000513326 H7BZZ5 65 aa1.22□□□□□ -2.21
HTT-211ENST00000513326 SERP1Q9Y6X1 66 aa1.22□□□□□ -2.21
HTT-211ENST00000513326 PRR15LQ9BU68 103 aa1.19□□□□□ -2.22
HTT-211ENST00000513326 A0A1B0GU69 56 aa1.18□□□□□ -2.22
HTT-211ENST00000513326 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
HTT-211ENST00000513326 UQCR11O14957 56 aa1.13□□□□□ -2.23
HTT-211ENST00000513326 LINC01558Q9Y6Z2 57 aa1.13□□□□□ -2.23
HTT-211ENST00000513326 CCDC179H3BU77 68 aa1.11□□□□□ -2.23
HTT-211ENST00000513326 MIR22HGQ0VDD5 57 aa1.07□□□□□ -2.24
HTT-211ENST00000513326 CDC42SE1Q9NRR8 79 aa1.06□□□□□ -2.24
HTT-211ENST00000513326 RPS28P62857 69 aaKnown RBP1.04□□□□□ -2.24
HTT-211ENST00000513326 INE1O15225 51 aa1.01□□□□□ -2.25
HTT-211ENST00000513326 ROMO1P60602 79 aa0.99□□□□□ -2.25
HTT-211ENST00000513326 BRK1Q8WUW1 75 aa0.86□□□□□ -2.27
HTT-211ENST00000513326 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.27
HTT-211ENST00000513326 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HTT-211ENST00000513326 PRM1P04553 51 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 38.6 ms