RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 TRAV22A0A0B4J277 110 aa3.01□□□□□ -1.93
PTPN20-228ENST00000513266 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
PTPN20-228ENST00000513266 LOC101927531A0A1B0GV80 90 aa3□□□□□ -1.93
PTPN20-228ENST00000513266 ATOX1O00244 68 aa2.98□□□□□ -1.93
PTPN20-228ENST00000513266 UQCRQO14949 82 aa2.97□□□□□ -1.93
PTPN20-228ENST00000513266 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
PTPN20-228ENST00000513266 SMIM20Q8N5G0 67 aa2.97□□□□□ -1.93
PTPN20-228ENST00000513266 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
PTPN20-228ENST00000513266 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
PTPN20-228ENST00000513266 H0Y9P7 68 aa2.95□□□□□ -1.94
PTPN20-228ENST00000513266 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
PTPN20-228ENST00000513266 C10orf95Q9H7T3 257 aa2.95□□□□□ -1.94
PTPN20-228ENST00000513266 MT3P25713 68 aa2.94□□□□□ -1.94
PTPN20-228ENST00000513266 MP68P56378 58 aa2.94□□□□□ -1.94
PTPN20-228ENST00000513266 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
PTPN20-228ENST00000513266 LINC00208Q96KT6 92 aa2.93□□□□□ -1.94
PTPN20-228ENST00000513266 V9GYY9 64 aa2.93□□□□□ -1.94
PTPN20-228ENST00000513266 COX7CP15954 63 aa2.92□□□□□ -1.94
PTPN20-228ENST00000513266 SNURFQ9Y675 71 aa2.91□□□□□ -1.94
PTPN20-228ENST00000513266 H3BPC8 53 aa2.9□□□□□ -1.95
PTPN20-228ENST00000513266 CCDC179H3BU77 68 aa2.89□□□□□ -1.95
PTPN20-228ENST00000513266 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
PTPN20-228ENST00000513266 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
PTPN20-228ENST00000513266 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
PTPN20-228ENST00000513266 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
PTPN20-228ENST00000513266 H7BZZ5 65 aa2.82□□□□□ -1.96
PTPN20-228ENST00000513266 SPANXA2-OT1Q8N9U9 137 aa2.79□□□□□ -1.96
PTPN20-228ENST00000513266 MT1AP04731 61 aa2.78□□□□□ -1.96
PTPN20-228ENST00000513266 TMEM258P61165 79 aa2.77□□□□□ -1.97
PTPN20-228ENST00000513266 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
PTPN20-228ENST00000513266 ACYP2P14621 99 aa2.76□□□□□ -1.97
PTPN20-228ENST00000513266 ATP5EP56381 51 aaPredicted RBP2.75□□□□□ -1.97
PTPN20-228ENST00000513266 CHKB-CPT1BH3BT56 60 aa2.74□□□□□ -1.97
PTPN20-228ENST00000513266 COA5Q86WW8 74 aa2.74□□□□□ -1.97
PTPN20-228ENST00000513266 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
PTPN20-228ENST00000513266 PRO0628Q9UI54 55 aa2.72□□□□□ -1.97
PTPN20-228ENST00000513266 SERP1Q9Y6X1 66 aa2.7□□□□□ -1.98
PTPN20-228ENST00000513266 SPTSSBQ8NFR3 76 aa2.69□□□□□ -1.98
PTPN20-228ENST00000513266 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
PTPN20-228ENST00000513266 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
PTPN20-228ENST00000513266 RPS28P62857 69 aaKnown RBP2.63□□□□□ -1.99
PTPN20-228ENST00000513266 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
PTPN20-228ENST00000513266 PSPHP1O15172 72 aa2.61□□□□□ -1.99
PTPN20-228ENST00000513266 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
PTPN20-228ENST00000513266 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
PTPN20-228ENST00000513266 A0A1B0GU69 56 aa2.59□□□□□ -1.99
PTPN20-228ENST00000513266 TNP1P09430 55 aa2.59□□□□□ -1.99
PTPN20-228ENST00000513266 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
PTPN20-228ENST00000513266 LINC01558Q9Y6Z2 57 aa2.59□□□□□ -1.99
PTPN20-228ENST00000513266 PRR15LQ9BU68 103 aa2.58□□□□□ -2
PTPN20-228ENST00000513266 KRTAP12-1P59990 96 aa2.57□□□□□ -2
PTPN20-228ENST00000513266 Q1T7F1 81 aa2.56□□□□□ -2
PTPN20-228ENST00000513266 A0A1B0GU33 70 aa2.53□□□□□ -2
PTPN20-228ENST00000513266 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
PTPN20-228ENST00000513266 A6NED7 52 aa2.48□□□□□ -2.01
PTPN20-228ENST00000513266 UQCR11O14957 56 aa2.48□□□□□ -2.01
PTPN20-228ENST00000513266 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
PTPN20-228ENST00000513266 A8MU10 97 aa2.46□□□□□ -2.02
PTPN20-228ENST00000513266 MIR22HGQ0VDD5 57 aa2.46□□□□□ -2.02
PTPN20-228ENST00000513266 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
PTPN20-228ENST00000513266 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
PTPN20-228ENST00000513266 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
PTPN20-228ENST00000513266 KRTAP25-1Q3LHN0 102 aa2.43□□□□□ -2.02
PTPN20-228ENST00000513266 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
PTPN20-228ENST00000513266 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
PTPN20-228ENST00000513266 CDC42SE1Q9NRR8 79 aa2.4□□□□□ -2.03
PTPN20-228ENST00000513266 K7ERS5 55 aa2.38□□□□□ -2.03
PTPN20-228ENST00000513266 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
PTPN20-228ENST00000513266 ROMO1P60602 79 aa2.25□□□□□ -2.05
PTPN20-228ENST00000513266 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
PTPN20-228ENST00000513266 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
PTPN20-228ENST00000513266 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
PTPN20-228ENST00000513266 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
PTPN20-228ENST00000513266 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
PTPN20-228ENST00000513266 INE1O15225 51 aa1.78□□□□□ -2.12
PTPN20-228ENST00000513266 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
PTPN20-228ENST00000513266 PRM1P04553 51 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 29.6 ms