RNA–Protein interactions for RNA: ENST00000511975.5

SEC31A-233, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 4

Gene SEC31A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-233	ENST00000511975	COA5	Q86WW8	74 aa		5.84	□□□□□ -1.47
SEC31A-233	ENST00000511975	TNP1	P09430	55 aa		5.83	□□□□□ -1.48
SEC31A-233	ENST00000511975	KRTAP12-4	P60329	112 aa		5.82	□□□□□ -1.48
SEC31A-233	ENST00000511975	KRTAP12-3	P60328	96 aa		5.75	□□□□□ -1.49
SEC31A-233	ENST00000511975	SYNE1	Q8NF91	8797 aa	Known RBP	5.74	□□□□□ -1.49
SEC31A-233	ENST00000511975		H3BS24	57 aa		5.72	□□□□□ -1.49
SEC31A-233	ENST00000511975	SMIM26	A0A096LP01	95 aa		5.7	□□□□□ -1.5
SEC31A-233	ENST00000511975		A8MU10	97 aa		5.7	□□□□□ -1.5
SEC31A-233	ENST00000511975	LOC100996750	A0A140TA64	210 aa		5.66	□□□□□ -1.5
SEC31A-233	ENST00000511975	SERP2	Q8N6R1	65 aa		5.64	□□□□□ -1.51
SEC31A-233	ENST00000511975	KRTAP4-11	Q9BYQ6	195 aa		5.61	□□□□□ -1.51
SEC31A-233	ENST00000511975		A0A1B0GU69	56 aa		5.54	□□□□□ -1.52
SEC31A-233	ENST00000511975		K7ERU9	68 aa		5.5	□□□□□ -1.53
SEC31A-233	ENST00000511975	KRTAP5-2	Q701N4	177 aa		5.48	□□□□□ -1.53
SEC31A-233	ENST00000511975	KRTAP5-8	O75690	187 aa		5.44	□□□□□ -1.54
SEC31A-233	ENST00000511975	MUC5AC	P98088	5654 aa		5.43	□□□□□ -1.54
SEC31A-233	ENST00000511975	AHNAK	Q09666	5890 aa	Known RBP	5.41	□□□□□ -1.54
SEC31A-233	ENST00000511975	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.41	□□□□□ -1.54
SEC31A-233	ENST00000511975		H7BZZ5	65 aa		5.38	□□□□□ -1.55
SEC31A-233	ENST00000511975	KRTAP19-4	Q3LI73	84 aa		5.38	□□□□□ -1.55
SEC31A-233	ENST00000511975	COX7C	P15954	63 aa		5.32	□□□□□ -1.56
SEC31A-233	ENST00000511975	KRTAP6-1	Q3LI64	71 aa		5.32	□□□□□ -1.56
SEC31A-233	ENST00000511975	MT1A	P04731	61 aa		5.3	□□□□□ -1.56
SEC31A-233	ENST00000511975	KRTAP25-1	Q3LHN0	102 aa		5.25	□□□□□ -1.57
SEC31A-233	ENST00000511975	LCE3C	Q5T5A8	94 aa		5.25	□□□□□ -1.57
SEC31A-233	ENST00000511975	OBSCN	Q5VST9	7968 aa		5.23	□□□□□ -1.57
SEC31A-233	ENST00000511975	KRTAP9-9	Q9BYP9	154 aa		5.22	□□□□□ -1.57
SEC31A-233	ENST00000511975	PRR15L	Q9BU68	103 aa		5.21	□□□□□ -1.58
SEC31A-233	ENST00000511975	KRTAP15-1	Q3LI76	137 aa		5.2	□□□□□ -1.58
SEC31A-233	ENST00000511975	KRTAP9-4	Q9BYQ2	154 aa		5.2	□□□□□ -1.58
SEC31A-233	ENST00000511975	KRTAP6-2	Q3LI66	62 aa		5.18	□□□□□ -1.58
SEC31A-233	ENST00000511975	LINC01558	Q9Y6Z2	57 aa		5.08	□□□□□ -1.6
SEC31A-233	ENST00000511975	KRTAP23-1	A1A580	65 aa		5.04	□□□□□ -1.6
SEC31A-233	ENST00000511975	UQCR11	O14957	56 aa		5.04	□□□□□ -1.6
SEC31A-233	ENST00000511975	KRTAP5-1	Q6L8H4	278 aa		5.01	□□□□□ -1.61
SEC31A-233	ENST00000511975	KRTAP9-6	A8MVA2	160 aa		5	□□□□□ -1.61
SEC31A-233	ENST00000511975	MIR22HG	Q0VDD5	57 aa		4.89	□□□□□ -1.63
SEC31A-233	ENST00000511975	MT3	P25713	68 aa		4.88	□□□□□ -1.63
SEC31A-233	ENST00000511975	KRTAP4-12	Q9BQ66	201 aa		4.88	□□□□□ -1.63
SEC31A-233	ENST00000511975		K7ERS5	55 aa		4.86	□□□□□ -1.63
SEC31A-233	ENST00000511975	ATP5E	P56381	51 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC31A-233	ENST00000511975	ANAPC13	Q9BS18	74 aa		4.82	□□□□□ -1.64
SEC31A-233	ENST00000511975	CCDC179	H3BU77	68 aa		4.79	□□□□□ -1.64
SEC31A-233	ENST00000511975	SVIP	Q8NHG7	77 aa		4.7	□□□□□ -1.66
SEC31A-233	ENST00000511975	RPS28	P62857	69 aa	Known RBP	4.64	□□□□□ -1.67
SEC31A-233	ENST00000511975	LCE1E	Q5T753	118 aa		4.6	□□□□□ -1.67
SEC31A-233	ENST00000511975		Q1T7F1	81 aa		4.55	□□□□□ -1.68
SEC31A-233	ENST00000511975	CDC42SE1	Q9NRR8	79 aa		4.55	□□□□□ -1.68
SEC31A-233	ENST00000511975	TMEM258	P61165	79 aa		4.54	□□□□□ -1.68
SEC31A-233	ENST00000511975	PSPHP1	O15172	72 aa		4.52	□□□□□ -1.69
SEC31A-233	ENST00000511975	ROMO1	P60602	79 aa		4.46	□□□□□ -1.7
SEC31A-233	ENST00000511975	KRTAP4-2	Q9BYR5	136 aa		4.41	□□□□□ -1.7
SEC31A-233	ENST00000511975		V9GYY9	64 aa		4.4	□□□□□ -1.71
SEC31A-233	ENST00000511975	LCE1B	Q5T7P3	118 aa		4.37	□□□□□ -1.71
SEC31A-233	ENST00000511975		A6NED7	52 aa		4.31	□□□□□ -1.72
SEC31A-233	ENST00000511975	LCE1C	Q5T751	118 aa		4.28	□□□□□ -1.72
SEC31A-233	ENST00000511975	PCP4	P48539	62 aa		4.23	□□□□□ -1.73
SEC31A-233	ENST00000511975		A0A0A0MQY5	61 aa		4.08	□□□□□ -1.76
SEC31A-233	ENST00000511975	KRTAP5-11	Q6L8G4	156 aa		3.96	□□□□□ -1.78
SEC31A-233	ENST00000511975	LCE1F	Q5T754	118 aa		3.92	□□□□□ -1.78
SEC31A-233	ENST00000511975	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.83	□□□□□ -1.8
SEC31A-233	ENST00000511975	PHGR1	C9JFL3	82 aa		3.77	□□□□□ -1.81
SEC31A-233	ENST00000511975	LCE3D	Q9BYE3	92 aa		3.67	□□□□□ -1.82
SEC31A-233	ENST00000511975	KRTAP21-2	Q3LI59	83 aa		3.53	□□□□□ -1.84
SEC31A-233	ENST00000511975	LCE3E	Q5T5B0	92 aa		3.37	□□□□□ -1.87
SEC31A-233	ENST00000511975	PRAC1	Q96KF2	57 aa		3.35	□□□□□ -1.87
SEC31A-233	ENST00000511975	KRTAP4-4	Q9BYR3	166 aa		3.29	□□□□□ -1.88
SEC31A-233	ENST00000511975	MUC19	Q7Z5P9	8384 aa		3.26	□□□□□ -1.89
SEC31A-233	ENST00000511975	NDUFAF8	A1L188	74 aa		3.17	□□□□□ -1.9
SEC31A-233	ENST00000511975	BRK1	Q8WUW1	75 aa		3.07	□□□□□ -1.92
SEC31A-233	ENST00000511975	PMAIP1	Q13794	54 aa		2.86	□□□□□ -1.95
SEC31A-233	ENST00000511975	KRTAP21-1	Q3LI58	79 aa		2.86	□□□□□ -1.95
SEC31A-233	ENST00000511975	LUZP6	Q538Z0	58 aa		2.53	□□□□□ -2
SEC31A-233	ENST00000511975	MUC16	Q8WXI7	14507 aa		2.29	□□□□□ -2.04
SEC31A-233	ENST00000511975	PRM1	P04553	51 aa		2.26	□□□□□ -2.05
SEC31A-233	ENST00000511975	KTN1-AS1	Q86SY8	53 aa		2.16	□□□□□ -2.06
SEC31A-233	ENST00000511975	PRO0628	Q9UI54	55 aa		2.08	□□□□□ -2.08
SEC31A-233	ENST00000511975	INE1	O15225	51 aa		0.97	□□□□□ -2.25

Retrieved 78 of 20,778 RNA–protein pairs in 61.4 ms