RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 MT1EP04732 61 aa4.35□□□□□ -1.71
SGCA-207ENST00000511303 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
SGCA-207ENST00000511303 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
SGCA-207ENST00000511303 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
SGCA-207ENST00000511303 MT1LQ93083 61 aa4.25□□□□□ -1.73
SGCA-207ENST00000511303 MT1GP13640 62 aa4.22□□□□□ -1.73
SGCA-207ENST00000511303 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
SGCA-207ENST00000511303 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
SGCA-207ENST00000511303 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SGCA-207ENST00000511303 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
SGCA-207ENST00000511303 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
SGCA-207ENST00000511303 LCE5AQ5TCM9 118 aa4.16□□□□□ -1.74
SGCA-207ENST00000511303 GPR98Q8WXG9 6306 aa4.13□□□□□ -1.75
SGCA-207ENST00000511303 SPRR2EP22531 72 aa4.11□□□□□ -1.75
SGCA-207ENST00000511303 SPRR2BP35325 72 aa4.11□□□□□ -1.75
SGCA-207ENST00000511303 SPRR2AP35326 72 aa4.11□□□□□ -1.75
SGCA-207ENST00000511303 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
SGCA-207ENST00000511303 MT1MQ8N339 61 aa4.09□□□□□ -1.75
SGCA-207ENST00000511303 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
SGCA-207ENST00000511303 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
SGCA-207ENST00000511303 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
SGCA-207ENST00000511303 SPRR2DP22532 72 aa3.97□□□□□ -1.77
SGCA-207ENST00000511303 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
SGCA-207ENST00000511303 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
SGCA-207ENST00000511303 KRTAP9-6A8MVA2 160 aa3.87□□□□□ -1.79
SGCA-207ENST00000511303 LCE3BQ5TA77 95 aa3.83□□□□□ -1.8
SGCA-207ENST00000511303 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
SGCA-207ENST00000511303 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
SGCA-207ENST00000511303 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
SGCA-207ENST00000511303 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
SGCA-207ENST00000511303 MT1AP04731 61 aa3.64□□□□□ -1.83
SGCA-207ENST00000511303 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
SGCA-207ENST00000511303 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
SGCA-207ENST00000511303 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
SGCA-207ENST00000511303 H3BS24 57 aa3.59□□□□□ -1.83
SGCA-207ENST00000511303 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
SGCA-207ENST00000511303 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SGCA-207ENST00000511303 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
SGCA-207ENST00000511303 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
SGCA-207ENST00000511303 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
SGCA-207ENST00000511303 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
SGCA-207ENST00000511303 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
SGCA-207ENST00000511303 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
SGCA-207ENST00000511303 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
SGCA-207ENST00000511303 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
SGCA-207ENST00000511303 MT4P47944 62 aa3.4□□□□□ -1.87
SGCA-207ENST00000511303 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
SGCA-207ENST00000511303 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
SGCA-207ENST00000511303 MT3P25713 68 aa3.33□□□□□ -1.88
SGCA-207ENST00000511303 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
SGCA-207ENST00000511303 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
SGCA-207ENST00000511303 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
SGCA-207ENST00000511303 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
SGCA-207ENST00000511303 INE1O15225 51 aa3.21□□□□□ -1.9
SGCA-207ENST00000511303 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
SGCA-207ENST00000511303 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
SGCA-207ENST00000511303 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
SGCA-207ENST00000511303 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
SGCA-207ENST00000511303 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
SGCA-207ENST00000511303 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
SGCA-207ENST00000511303 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
SGCA-207ENST00000511303 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
SGCA-207ENST00000511303 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SGCA-207ENST00000511303 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
SGCA-207ENST00000511303 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
SGCA-207ENST00000511303 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
SGCA-207ENST00000511303 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
SGCA-207ENST00000511303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
SGCA-207ENST00000511303 PRM1P04553 51 aa2.54□□□□□ -2
SGCA-207ENST00000511303 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
SGCA-207ENST00000511303 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SGCA-207ENST00000511303 LCE1FQ5T754 118 aa2.25□□□□□ -2.05
SGCA-207ENST00000511303 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
SGCA-207ENST00000511303 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SGCA-207ENST00000511303 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SGCA-207ENST00000511303 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
SGCA-207ENST00000511303 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
SGCA-207ENST00000511303 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 101.7 ms