RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SPRR2DP22532 72 aa1.24□□□□□ -2.21
CLOCK-209ENST00000511124 A0A0D9SG42 100 aa1.24□□□□□ -2.21
CLOCK-209ENST00000511124 COA5Q86WW8 74 aa1.24□□□□□ -2.21
CLOCK-209ENST00000511124 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
CLOCK-209ENST00000511124 LUZP6Q538Z0 58 aa1.23□□□□□ -2.21
CLOCK-209ENST00000511124 KRTAP2-2Q9BYT5 123 aa1.23□□□□□ -2.21
CLOCK-209ENST00000511124 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
CLOCK-209ENST00000511124 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
CLOCK-209ENST00000511124 SNURFQ9Y675 71 aa1.23□□□□□ -2.21
CLOCK-209ENST00000511124 SPRR5A0A1B0GTR4 108 aa1.22□□□□□ -2.21
CLOCK-209ENST00000511124 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
CLOCK-209ENST00000511124 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
CLOCK-209ENST00000511124 NEBP20929 6669 aa1.21□□□□□ -2.22
CLOCK-209ENST00000511124 KRTAP12-2P59991 146 aa1.21□□□□□ -2.22
CLOCK-209ENST00000511124 BRK1Q8WUW1 75 aa1.21□□□□□ -2.22
CLOCK-209ENST00000511124 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
CLOCK-209ENST00000511124 USH2AO75445 5202 aa1.2□□□□□ -2.22
CLOCK-209ENST00000511124 KRTAP25-1Q3LHN0 102 aa1.2□□□□□ -2.22
CLOCK-209ENST00000511124 LCE1FQ5T754 118 aa1.19□□□□□ -2.22
CLOCK-209ENST00000511124 A6NED7 52 aa1.19□□□□□ -2.22
CLOCK-209ENST00000511124 ROMO1P60602 79 aa1.19□□□□□ -2.22
CLOCK-209ENST00000511124 KRTAP10-7P60409 375 aaPredicted RBP1.18□□□□□ -2.22
CLOCK-209ENST00000511124 KRTAP10-12P60413 245 aa1.18□□□□□ -2.22
CLOCK-209ENST00000511124 MIR22HGQ0VDD5 57 aa1.18□□□□□ -2.22
CLOCK-209ENST00000511124 NDUFAF8A1L188 74 aa1.17□□□□□ -2.22
CLOCK-209ENST00000511124 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
CLOCK-209ENST00000511124 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CLOCK-209ENST00000511124 MT1BP07438 61 aa1.14□□□□□ -2.23
CLOCK-209ENST00000511124 LINC01558Q9Y6Z2 57 aa1.14□□□□□ -2.23
CLOCK-209ENST00000511124 KRTAP12-4P60329 112 aa1.13□□□□□ -2.23
CLOCK-209ENST00000511124 MT1GP13640 62 aa1.12□□□□□ -2.23
CLOCK-209ENST00000511124 KRTAP5-5Q701N2 237 aaPredicted RBP1.12□□□□□ -2.23
CLOCK-209ENST00000511124 KRTAP13-4Q3LI77 160 aa1.11□□□□□ -2.23
CLOCK-209ENST00000511124 MT3P25713 68 aa1.1□□□□□ -2.23
CLOCK-209ENST00000511124 SPATA8Q6RVD6 105 aa1.1□□□□□ -2.23
CLOCK-209ENST00000511124 LCE1EQ5T753 118 aa1.09□□□□□ -2.23
CLOCK-209ENST00000511124 KRTAP5-1Q6L8H4 278 aa1.09□□□□□ -2.24
CLOCK-209ENST00000511124 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
CLOCK-209ENST00000511124 MT1XP80297 61 aa1.07□□□□□ -2.24
CLOCK-209ENST00000511124 KRTAP12-3P60328 96 aa1.07□□□□□ -2.24
CLOCK-209ENST00000511124 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
CLOCK-209ENST00000511124 SYNE2Q8WXH0 6885 aaKnown RBP1.05□□□□□ -2.24
CLOCK-209ENST00000511124 KRTAP12-1P59990 96 aa1.05□□□□□ -2.24
CLOCK-209ENST00000511124 KMT2DO14686 5537 aa1.04□□□□□ -2.24
CLOCK-209ENST00000511124 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
CLOCK-209ENST00000511124 MT4P47944 62 aa1.01□□□□□ -2.25
CLOCK-209ENST00000511124 OBSCNQ5VST9 7968 aa1.01□□□□□ -2.25
CLOCK-209ENST00000511124 MT1EP04732 61 aa1□□□□□ -2.25
CLOCK-209ENST00000511124 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
CLOCK-209ENST00000511124 KRTAP9-6A8MVA2 160 aa1□□□□□ -2.25
CLOCK-209ENST00000511124 LCE3AQ5TA76 89 aa0.99□□□□□ -2.25
CLOCK-209ENST00000511124 MT1MQ8N339 61 aa0.98□□□□□ -2.25
CLOCK-209ENST00000511124 FSIP2Q5CZC0 6907 aa0.98□□□□□ -2.25
CLOCK-209ENST00000511124 MT1LQ93083 61 aa0.97□□□□□ -2.25
CLOCK-209ENST00000511124 FCGBPQ9Y6R7 5405 aaPredicted RBP0.97□□□□□ -2.25
CLOCK-209ENST00000511124 LCE3CQ5T5A8 94 aa0.93□□□□□ -2.26
CLOCK-209ENST00000511124 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
CLOCK-209ENST00000511124 INE1O15225 51 aa0.93□□□□□ -2.26
CLOCK-209ENST00000511124 KRTAP19-7Q3SYF9 63 aa0.92□□□□□ -2.26
CLOCK-209ENST00000511124 MT1AP04731 61 aa0.91□□□□□ -2.26
CLOCK-209ENST00000511124 KRTAP4-3Q9BYR4 195 aa0.9□□□□□ -2.27
CLOCK-209ENST00000511124 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
CLOCK-209ENST00000511124 LCE3EQ5T5B0 92 aa0.87□□□□□ -2.27
CLOCK-209ENST00000511124 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
CLOCK-209ENST00000511124 MUC12Q9UKN1 5478 aa0.86□□□□□ -2.27
CLOCK-209ENST00000511124 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
CLOCK-209ENST00000511124 LCE3DQ9BYE3 92 aa0.79□□□□□ -2.28
CLOCK-209ENST00000511124 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
CLOCK-209ENST00000511124 LCE1BQ5T7P3 118 aa0.78□□□□□ -2.28
CLOCK-209ENST00000511124 SYNE1Q8NF91 8797 aaKnown RBP0.77□□□□□ -2.29
CLOCK-209ENST00000511124 KRTAP6-1Q3LI64 71 aa0.75□□□□□ -2.29
CLOCK-209ENST00000511124 LCE1CQ5T751 118 aa0.71□□□□□ -2.3
CLOCK-209ENST00000511124 MUC19Q7Z5P9 8384 aa0.69□□□□□ -2.3
CLOCK-209ENST00000511124 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
CLOCK-209ENST00000511124 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
CLOCK-209ENST00000511124 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
CLOCK-209ENST00000511124 KRTAP21-2Q3LI59 83 aa0.55□□□□□ -2.32
CLOCK-209ENST00000511124 PRM1P04553 51 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 96.9 ms