RNA–Protein interactions for RNA: ENST00000510834.1

BRIX1-203, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 1 (best)

Gene BRIX1, Length 2,380 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-203ENST00000510834 PRO2289Q9P1D8 64 aa4.19□□□□□ -1.74
BRIX1-203ENST00000510834 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
BRIX1-203ENST00000510834 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
BRIX1-203ENST00000510834 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
BRIX1-203ENST00000510834 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
BRIX1-203ENST00000510834 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
BRIX1-203ENST00000510834 USH2AO75445 5202 aa4.08□□□□□ -1.76
BRIX1-203ENST00000510834 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
BRIX1-203ENST00000510834 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
BRIX1-203ENST00000510834 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
BRIX1-203ENST00000510834 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
BRIX1-203ENST00000510834 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
BRIX1-203ENST00000510834 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
BRIX1-203ENST00000510834 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
BRIX1-203ENST00000510834 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
BRIX1-203ENST00000510834 KMT2DO14686 5537 aa3.89□□□□□ -1.79
BRIX1-203ENST00000510834 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
BRIX1-203ENST00000510834 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
BRIX1-203ENST00000510834 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
BRIX1-203ENST00000510834 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
BRIX1-203ENST00000510834 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
BRIX1-203ENST00000510834 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
BRIX1-203ENST00000510834 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
BRIX1-203ENST00000510834 KRTAP2-2Q9BYT5 123 aa3.73□□□□□ -1.81
BRIX1-203ENST00000510834 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
BRIX1-203ENST00000510834 MT1EP04732 61 aa3.73□□□□□ -1.81
BRIX1-203ENST00000510834 MT1LQ93083 61 aa3.69□□□□□ -1.82
BRIX1-203ENST00000510834 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
BRIX1-203ENST00000510834 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.83
BRIX1-203ENST00000510834 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
BRIX1-203ENST00000510834 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.83
BRIX1-203ENST00000510834 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
BRIX1-203ENST00000510834 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
BRIX1-203ENST00000510834 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
BRIX1-203ENST00000510834 MT1GP13640 62 aa3.51□□□□□ -1.85
BRIX1-203ENST00000510834 MT1MQ8N339 61 aa3.49□□□□□ -1.85
BRIX1-203ENST00000510834 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
BRIX1-203ENST00000510834 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
BRIX1-203ENST00000510834 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
BRIX1-203ENST00000510834 INE1O15225 51 aa3.41□□□□□ -1.86
BRIX1-203ENST00000510834 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
BRIX1-203ENST00000510834 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
BRIX1-203ENST00000510834 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
BRIX1-203ENST00000510834 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
BRIX1-203ENST00000510834 SPRR2EP22531 72 aa3.23□□□□□ -1.89
BRIX1-203ENST00000510834 SPRR2BP35325 72 aa3.23□□□□□ -1.89
BRIX1-203ENST00000510834 SPRR2AP35326 72 aa3.23□□□□□ -1.89
BRIX1-203ENST00000510834 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
BRIX1-203ENST00000510834 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
BRIX1-203ENST00000510834 MT1AP04731 61 aa3.13□□□□□ -1.91
BRIX1-203ENST00000510834 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
BRIX1-203ENST00000510834 SPRR2DP22532 72 aa3.1□□□□□ -1.91
BRIX1-203ENST00000510834 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
BRIX1-203ENST00000510834 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
BRIX1-203ENST00000510834 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
BRIX1-203ENST00000510834 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
BRIX1-203ENST00000510834 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
BRIX1-203ENST00000510834 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
BRIX1-203ENST00000510834 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
BRIX1-203ENST00000510834 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
BRIX1-203ENST00000510834 MT3P25713 68 aa2.81□□□□□ -1.96
BRIX1-203ENST00000510834 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
BRIX1-203ENST00000510834 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
BRIX1-203ENST00000510834 MT4P47944 62 aa2.68□□□□□ -1.98
BRIX1-203ENST00000510834 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
BRIX1-203ENST00000510834 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
BRIX1-203ENST00000510834 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
BRIX1-203ENST00000510834 PRM1P04553 51 aa2.59□□□□□ -2
BRIX1-203ENST00000510834 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
BRIX1-203ENST00000510834 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
BRIX1-203ENST00000510834 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
BRIX1-203ENST00000510834 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
BRIX1-203ENST00000510834 LCE1FQ5T754 118 aa2.09□□□□□ -2.08
BRIX1-203ENST00000510834 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
BRIX1-203ENST00000510834 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
BRIX1-203ENST00000510834 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
BRIX1-203ENST00000510834 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
BRIX1-203ENST00000510834 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 89.6 ms