RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 SPRR2AP35326 72 aa6.26□□□□□ -1.41
SCAMP1-203ENST00000510030 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
SCAMP1-203ENST00000510030 KRTAP2-3P0C7H8 128 aa6.24□□□□□ -1.41
SCAMP1-203ENST00000510030 KRTAP2-4Q9BYR9 128 aa6.24□□□□□ -1.41
SCAMP1-203ENST00000510030 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
SCAMP1-203ENST00000510030 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
SCAMP1-203ENST00000510030 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
SCAMP1-203ENST00000510030 MT1EP04732 61 aa6.11□□□□□ -1.43
SCAMP1-203ENST00000510030 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
SCAMP1-203ENST00000510030 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
SCAMP1-203ENST00000510030 SPRR2DP22532 72 aa6.04□□□□□ -1.44
SCAMP1-203ENST00000510030 KRTAP2-2Q9BYT5 123 aa6.03□□□□□ -1.44
SCAMP1-203ENST00000510030 KRTAP2-1Q9BYU5 128 aa6.03□□□□□ -1.44
SCAMP1-203ENST00000510030 MT1LQ93083 61 aa5.96□□□□□ -1.46
SCAMP1-203ENST00000510030 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
SCAMP1-203ENST00000510030 MT1GP13640 62 aa5.92□□□□□ -1.46
SCAMP1-203ENST00000510030 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
SCAMP1-203ENST00000510030 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
SCAMP1-203ENST00000510030 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
SCAMP1-203ENST00000510030 MT1MQ8N339 61 aa5.77□□□□□ -1.49
SCAMP1-203ENST00000510030 GPR98Q8WXG9 6306 aa5.7□□□□□ -1.5
SCAMP1-203ENST00000510030 DSTQ03001 7570 aaKnown RBP5.7□□□□□ -1.5
SCAMP1-203ENST00000510030 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
SCAMP1-203ENST00000510030 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
SCAMP1-203ENST00000510030 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
SCAMP1-203ENST00000510030 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
SCAMP1-203ENST00000510030 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
SCAMP1-203ENST00000510030 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
SCAMP1-203ENST00000510030 MT4P47944 62 aa5.37□□□□□ -1.55
SCAMP1-203ENST00000510030 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
SCAMP1-203ENST00000510030 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
SCAMP1-203ENST00000510030 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
SCAMP1-203ENST00000510030 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
SCAMP1-203ENST00000510030 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
SCAMP1-203ENST00000510030 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
SCAMP1-203ENST00000510030 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
SCAMP1-203ENST00000510030 KRTAP5-10Q6L8G5 202 aa5.14□□□□□ -1.59
SCAMP1-203ENST00000510030 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
SCAMP1-203ENST00000510030 MT1AP04731 61 aa5.12□□□□□ -1.59
SCAMP1-203ENST00000510030 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
SCAMP1-203ENST00000510030 KRTAP12-4P60329 112 aa5□□□□□ -1.61
SCAMP1-203ENST00000510030 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
SCAMP1-203ENST00000510030 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
SCAMP1-203ENST00000510030 KRTAP5-7Q6L8G8 165 aa4.92□□□□□ -1.62
SCAMP1-203ENST00000510030 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
SCAMP1-203ENST00000510030 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SCAMP1-203ENST00000510030 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
SCAMP1-203ENST00000510030 MT3P25713 68 aa4.68□□□□□ -1.66
SCAMP1-203ENST00000510030 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
SCAMP1-203ENST00000510030 KRTAP5-2Q701N4 177 aa4.58□□□□□ -1.68
SCAMP1-203ENST00000510030 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
SCAMP1-203ENST00000510030 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SCAMP1-203ENST00000510030 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
SCAMP1-203ENST00000510030 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
SCAMP1-203ENST00000510030 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
SCAMP1-203ENST00000510030 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
SCAMP1-203ENST00000510030 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
SCAMP1-203ENST00000510030 INE1O15225 51 aa4.33□□□□□ -1.72
SCAMP1-203ENST00000510030 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
SCAMP1-203ENST00000510030 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
SCAMP1-203ENST00000510030 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
SCAMP1-203ENST00000510030 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SCAMP1-203ENST00000510030 H3BS24 57 aa4.1□□□□□ -1.75
SCAMP1-203ENST00000510030 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
SCAMP1-203ENST00000510030 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
SCAMP1-203ENST00000510030 LCE1BQ5T7P3 118 aa3.83□□□□□ -1.8
SCAMP1-203ENST00000510030 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
SCAMP1-203ENST00000510030 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-203ENST00000510030 PRM1P04553 51 aa3.54□□□□□ -1.84
SCAMP1-203ENST00000510030 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SCAMP1-203ENST00000510030 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
SCAMP1-203ENST00000510030 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
SCAMP1-203ENST00000510030 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SCAMP1-203ENST00000510030 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SCAMP1-203ENST00000510030 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
SCAMP1-203ENST00000510030 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SCAMP1-203ENST00000510030 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
SCAMP1-203ENST00000510030 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 44.1 ms