RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 K7ERS5 55 aa4.94□□□□□ -1.62
SNF8-206ENST00000509989 TNP1P09430 55 aa4.88□□□□□ -1.63
SNF8-206ENST00000509989 MT1LQ93083 61 aa4.85□□□□□ -1.63
SNF8-206ENST00000509989 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
SNF8-206ENST00000509989 MT1GP13640 62 aa4.82□□□□□ -1.64
SNF8-206ENST00000509989 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
SNF8-206ENST00000509989 MT1MQ8N339 61 aa4.81□□□□□ -1.64
SNF8-206ENST00000509989 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
SNF8-206ENST00000509989 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
SNF8-206ENST00000509989 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SNF8-206ENST00000509989 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
SNF8-206ENST00000509989 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
SNF8-206ENST00000509989 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
SNF8-206ENST00000509989 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.67
SNF8-206ENST00000509989 ROMO1P60602 79 aa4.58□□□□□ -1.68
SNF8-206ENST00000509989 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
SNF8-206ENST00000509989 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
SNF8-206ENST00000509989 MT4P47944 62 aa4.53□□□□□ -1.68
SNF8-206ENST00000509989 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
SNF8-206ENST00000509989 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
SNF8-206ENST00000509989 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
SNF8-206ENST00000509989 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
SNF8-206ENST00000509989 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
SNF8-206ENST00000509989 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
SNF8-206ENST00000509989 KRTAP4-6Q9BYQ5 205 aa4.46□□□□□ -1.7
SNF8-206ENST00000509989 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
SNF8-206ENST00000509989 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
SNF8-206ENST00000509989 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
SNF8-206ENST00000509989 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
SNF8-206ENST00000509989 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SNF8-206ENST00000509989 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
SNF8-206ENST00000509989 KRTAP19-4Q3LI73 84 aa4.27□□□□□ -1.73
SNF8-206ENST00000509989 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
SNF8-206ENST00000509989 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
SNF8-206ENST00000509989 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
SNF8-206ENST00000509989 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
SNF8-206ENST00000509989 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
SNF8-206ENST00000509989 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SNF8-206ENST00000509989 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
SNF8-206ENST00000509989 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
SNF8-206ENST00000509989 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
SNF8-206ENST00000509989 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
SNF8-206ENST00000509989 MT1AP04731 61 aa4.1□□□□□ -1.75
SNF8-206ENST00000509989 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
SNF8-206ENST00000509989 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
SNF8-206ENST00000509989 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
SNF8-206ENST00000509989 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
SNF8-206ENST00000509989 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
SNF8-206ENST00000509989 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
SNF8-206ENST00000509989 MT3P25713 68 aa3.7□□□□□ -1.82
SNF8-206ENST00000509989 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SNF8-206ENST00000509989 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SNF8-206ENST00000509989 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
SNF8-206ENST00000509989 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
SNF8-206ENST00000509989 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
SNF8-206ENST00000509989 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
SNF8-206ENST00000509989 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
SNF8-206ENST00000509989 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
SNF8-206ENST00000509989 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
SNF8-206ENST00000509989 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SNF8-206ENST00000509989 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SNF8-206ENST00000509989 H3BS24 57 aa3.17□□□□□ -1.9
SNF8-206ENST00000509989 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
SNF8-206ENST00000509989 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
SNF8-206ENST00000509989 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
SNF8-206ENST00000509989 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
SNF8-206ENST00000509989 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
SNF8-206ENST00000509989 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
SNF8-206ENST00000509989 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
SNF8-206ENST00000509989 INE1O15225 51 aa2.75□□□□□ -1.97
SNF8-206ENST00000509989 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
SNF8-206ENST00000509989 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
SNF8-206ENST00000509989 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SNF8-206ENST00000509989 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SNF8-206ENST00000509989 PRM1P04553 51 aa2.33□□□□□ -2.04
SNF8-206ENST00000509989 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
SNF8-206ENST00000509989 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SNF8-206ENST00000509989 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms