RNA–Protein interactions for RNA: ENST00000509647.1

FAT1-208, Transcript of FAT atypical cadherin 1, humanhuman

TSL 1 (best)

Gene FAT1, Length 1,852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-208ENST00000509647 KRTAP12-3P60328 96 aa6.15□□□□□ -1.42
FAT1-208ENST00000509647 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
FAT1-208ENST00000509647 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
FAT1-208ENST00000509647 NEBP20929 6669 aa6.04□□□□□ -1.44
FAT1-208ENST00000509647 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.47
FAT1-208ENST00000509647 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
FAT1-208ENST00000509647 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
FAT1-208ENST00000509647 SPRR2EP22531 72 aa5.87□□□□□ -1.47
FAT1-208ENST00000509647 SPRR2BP35325 72 aa5.87□□□□□ -1.47
FAT1-208ENST00000509647 SPRR2AP35326 72 aa5.87□□□□□ -1.47
FAT1-208ENST00000509647 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
FAT1-208ENST00000509647 MT1EP04732 61 aa5.78□□□□□ -1.48
FAT1-208ENST00000509647 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
FAT1-208ENST00000509647 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
FAT1-208ENST00000509647 SPRR2DP22532 72 aa5.66□□□□□ -1.5
FAT1-208ENST00000509647 INE1O15225 51 aa5.65□□□□□ -1.5
FAT1-208ENST00000509647 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
FAT1-208ENST00000509647 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
FAT1-208ENST00000509647 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
FAT1-208ENST00000509647 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
FAT1-208ENST00000509647 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
FAT1-208ENST00000509647 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
FAT1-208ENST00000509647 MT1LQ93083 61 aa5.58□□□□□ -1.52
FAT1-208ENST00000509647 KRTAP4-6Q9BYQ5 205 aa5.58□□□□□ -1.52
FAT1-208ENST00000509647 MT1GP13640 62 aa5.55□□□□□ -1.52
FAT1-208ENST00000509647 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
FAT1-208ENST00000509647 MT1MQ8N339 61 aa5.48□□□□□ -1.53
FAT1-208ENST00000509647 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
FAT1-208ENST00000509647 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
FAT1-208ENST00000509647 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
FAT1-208ENST00000509647 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
FAT1-208ENST00000509647 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
FAT1-208ENST00000509647 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
FAT1-208ENST00000509647 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
FAT1-208ENST00000509647 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
FAT1-208ENST00000509647 LCE4AQ5TA78 99 aa5□□□□□ -1.61
FAT1-208ENST00000509647 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
FAT1-208ENST00000509647 MT4P47944 62 aa4.97□□□□□ -1.61
FAT1-208ENST00000509647 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
FAT1-208ENST00000509647 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
FAT1-208ENST00000509647 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
FAT1-208ENST00000509647 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
FAT1-208ENST00000509647 MT1AP04731 61 aa4.72□□□□□ -1.65
FAT1-208ENST00000509647 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
FAT1-208ENST00000509647 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
FAT1-208ENST00000509647 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
FAT1-208ENST00000509647 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
FAT1-208ENST00000509647 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
FAT1-208ENST00000509647 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
FAT1-208ENST00000509647 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
FAT1-208ENST00000509647 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
FAT1-208ENST00000509647 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
FAT1-208ENST00000509647 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
FAT1-208ENST00000509647 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
FAT1-208ENST00000509647 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
FAT1-208ENST00000509647 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
FAT1-208ENST00000509647 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
FAT1-208ENST00000509647 MT3P25713 68 aa4.29□□□□□ -1.72
FAT1-208ENST00000509647 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
FAT1-208ENST00000509647 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
FAT1-208ENST00000509647 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
FAT1-208ENST00000509647 PRM1P04553 51 aa4.08□□□□□ -1.76
FAT1-208ENST00000509647 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
FAT1-208ENST00000509647 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
FAT1-208ENST00000509647 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
FAT1-208ENST00000509647 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
FAT1-208ENST00000509647 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
FAT1-208ENST00000509647 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
FAT1-208ENST00000509647 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
FAT1-208ENST00000509647 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
FAT1-208ENST00000509647 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
FAT1-208ENST00000509647 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
FAT1-208ENST00000509647 LCE1FQ5T754 118 aa3.03□□□□□ -1.93
FAT1-208ENST00000509647 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
FAT1-208ENST00000509647 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
FAT1-208ENST00000509647 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
FAT1-208ENST00000509647 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
FAT1-208ENST00000509647 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms