RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 CYSTM1Q9H1C7 97 aa1.97□□□□□ -2.09
HTT-206ENST00000509618 PSPHP1O15172 72 aa1.96□□□□□ -2.1
HTT-206ENST00000509618 CAMK2N1Q7Z7J9 78 aa1.96□□□□□ -2.1
HTT-206ENST00000509618 A0A0D9SG42 100 aa1.95□□□□□ -2.1
HTT-206ENST00000509618 KRTAP13-4Q3LI77 160 aa1.95□□□□□ -2.1
HTT-206ENST00000509618 A0A1B0GU33 70 aa1.94□□□□□ -2.1
HTT-206ENST00000509618 CCDC179H3BU77 68 aa1.94□□□□□ -2.1
HTT-206ENST00000509618 A0A1B0GU69 56 aa1.93□□□□□ -2.1
HTT-206ENST00000509618 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
HTT-206ENST00000509618 PRO0628Q9UI54 55 aa1.93□□□□□ -2.1
HTT-206ENST00000509618 SMIM26A0A096LP01 95 aa1.92□□□□□ -2.1
HTT-206ENST00000509618 ATP5EP56381 51 aaPredicted RBP1.92□□□□□ -2.1
HTT-206ENST00000509618 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
HTT-206ENST00000509618 KRTAP10-12P60413 245 aa1.9□□□□□ -2.11
HTT-206ENST00000509618 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
HTT-206ENST00000509618 PRR15LQ9BU68 103 aa1.89□□□□□ -2.11
HTT-206ENST00000509618 TMEM258P61165 79 aa1.88□□□□□ -2.11
HTT-206ENST00000509618 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
HTT-206ENST00000509618 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
HTT-206ENST00000509618 A8MU10 97 aa1.86□□□□□ -2.11
HTT-206ENST00000509618 PMAIP1Q13794 54 aa1.85□□□□□ -2.11
HTT-206ENST00000509618 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
HTT-206ENST00000509618 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
HTT-206ENST00000509618 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
HTT-206ENST00000509618 LINC01558Q9Y6Z2 57 aa1.84□□□□□ -2.11
HTT-206ENST00000509618 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
HTT-206ENST00000509618 MT1EP04732 61 aa1.83□□□□□ -2.12
HTT-206ENST00000509618 KRTAP4-3Q9BYR4 195 aa1.83□□□□□ -2.12
HTT-206ENST00000509618 UQCR11O14957 56 aa1.82□□□□□ -2.12
HTT-206ENST00000509618 TNP1P09430 55 aa1.8□□□□□ -2.12
HTT-206ENST00000509618 KRTAP20-2Q3LI61 65 aa1.8□□□□□ -2.12
HTT-206ENST00000509618 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
HTT-206ENST00000509618 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
HTT-206ENST00000509618 K7ERS5 55 aa1.77□□□□□ -2.13
HTT-206ENST00000509618 MT1MQ8N339 61 aa1.77□□□□□ -2.13
HTT-206ENST00000509618 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
HTT-206ENST00000509618 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
HTT-206ENST00000509618 LCE3AQ5TA76 89 aa1.76□□□□□ -2.13
HTT-206ENST00000509618 Q1T7F1 81 aa1.74□□□□□ -2.13
HTT-206ENST00000509618 PP632Q6XCG6 107 aa1.74□□□□□ -2.13
HTT-206ENST00000509618 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
HTT-206ENST00000509618 MT1GP13640 62 aa1.73□□□□□ -2.13
HTT-206ENST00000509618 RPS28P62857 69 aaKnown RBP1.73□□□□□ -2.13
HTT-206ENST00000509618 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
HTT-206ENST00000509618 A6NED7 52 aa1.72□□□□□ -2.13
HTT-206ENST00000509618 KRTAP25-1Q3LHN0 102 aa1.71□□□□□ -2.14
HTT-206ENST00000509618 MT1LQ93083 61 aa1.71□□□□□ -2.14
HTT-206ENST00000509618 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
HTT-206ENST00000509618 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
HTT-206ENST00000509618 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
HTT-206ENST00000509618 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
HTT-206ENST00000509618 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
HTT-206ENST00000509618 ROMO1P60602 79 aa1.63□□□□□ -2.15
HTT-206ENST00000509618 LCE3CQ5T5A8 94 aa1.62□□□□□ -2.15
HTT-206ENST00000509618 LCE1EQ5T753 118 aa1.62□□□□□ -2.15
HTT-206ENST00000509618 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
HTT-206ENST00000509618 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
HTT-206ENST00000509618 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
HTT-206ENST00000509618 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
HTT-206ENST00000509618 BRK1Q8WUW1 75 aa1.53□□□□□ -2.16
HTT-206ENST00000509618 OBSCNQ5VST9 7968 aa1.53□□□□□ -2.17
HTT-206ENST00000509618 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
HTT-206ENST00000509618 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
HTT-206ENST00000509618 LCE3EQ5T5B0 92 aa1.47□□□□□ -2.17
HTT-206ENST00000509618 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
HTT-206ENST00000509618 MT1AP04731 61 aa1.46□□□□□ -2.18
HTT-206ENST00000509618 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
HTT-206ENST00000509618 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
HTT-206ENST00000509618 INE1O15225 51 aa1.26□□□□□ -2.21
HTT-206ENST00000509618 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
HTT-206ENST00000509618 LCE3DQ9BYE3 92 aa1.25□□□□□ -2.21
HTT-206ENST00000509618 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
HTT-206ENST00000509618 LCE1CQ5T751 118 aa1.15□□□□□ -2.23
HTT-206ENST00000509618 KRTAP21-2Q3LI59 83 aa0.97□□□□□ -2.25
HTT-206ENST00000509618 MUC19Q7Z5P9 8384 aa0.96□□□□□ -2.26
HTT-206ENST00000509618 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
HTT-206ENST00000509618 PRM1P04553 51 aa0.83□□□□□ -2.28
HTT-206ENST00000509618 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 47.4 ms