RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 LCE5AQ5TCM9 118 aa7.16□□□□□ -1.26
FGFR4-211ENST00000509511 LCE3BQ5TA77 95 aa7.15□□□□□ -1.26
FGFR4-211ENST00000509511 KRTAP2-2Q9BYT5 123 aa7.14□□□□□ -1.27
FGFR4-211ENST00000509511 KRTAP2-1Q9BYU5 128 aa7.14□□□□□ -1.27
FGFR4-211ENST00000509511 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
FGFR4-211ENST00000509511 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
FGFR4-211ENST00000509511 MT1GP13640 62 aa7.04□□□□□ -1.28
FGFR4-211ENST00000509511 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
FGFR4-211ENST00000509511 MT1LQ93083 61 aa7.02□□□□□ -1.28
FGFR4-211ENST00000509511 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
FGFR4-211ENST00000509511 PMAIP1Q13794 54 aa6.95□□□□□ -1.3
FGFR4-211ENST00000509511 MT1MQ8N339 61 aa6.94□□□□□ -1.3
FGFR4-211ENST00000509511 ROMO1P60602 79 aa6.89□□□□□ -1.31
FGFR4-211ENST00000509511 DSTQ03001 7570 aaKnown RBP6.88□□□□□ -1.31
FGFR4-211ENST00000509511 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
FGFR4-211ENST00000509511 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
FGFR4-211ENST00000509511 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.35
FGFR4-211ENST00000509511 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
FGFR4-211ENST00000509511 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
FGFR4-211ENST00000509511 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
FGFR4-211ENST00000509511 KRTAP4-9Q9BYQ8 210 aa6.54□□□□□ -1.36
FGFR4-211ENST00000509511 LCE4AQ5TA78 99 aa6.53□□□□□ -1.36
FGFR4-211ENST00000509511 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
FGFR4-211ENST00000509511 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
FGFR4-211ENST00000509511 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
FGFR4-211ENST00000509511 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
FGFR4-211ENST00000509511 GPR98Q8WXG9 6306 aa6.42□□□□□ -1.38
FGFR4-211ENST00000509511 MT4P47944 62 aa6.42□□□□□ -1.38
FGFR4-211ENST00000509511 HMCN1Q96RW7 5635 aa6.38□□□□□ -1.39
FGFR4-211ENST00000509511 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
FGFR4-211ENST00000509511 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
FGFR4-211ENST00000509511 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
FGFR4-211ENST00000509511 SVIPQ8NHG7 77 aa6.22□□□□□ -1.41
FGFR4-211ENST00000509511 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
FGFR4-211ENST00000509511 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
FGFR4-211ENST00000509511 KRTAP20-2Q3LI61 65 aa6.07□□□□□ -1.44
FGFR4-211ENST00000509511 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
FGFR4-211ENST00000509511 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
FGFR4-211ENST00000509511 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
FGFR4-211ENST00000509511 MT1AP04731 61 aa5.99□□□□□ -1.45
FGFR4-211ENST00000509511 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
FGFR4-211ENST00000509511 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
FGFR4-211ENST00000509511 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
FGFR4-211ENST00000509511 KRTAP5-7Q6L8G8 165 aa5.74□□□□□ -1.49
FGFR4-211ENST00000509511 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
FGFR4-211ENST00000509511 KRTAP5-2Q701N4 177 aa5.71□□□□□ -1.5
FGFR4-211ENST00000509511 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
FGFR4-211ENST00000509511 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
FGFR4-211ENST00000509511 MT3P25713 68 aa5.47□□□□□ -1.53
FGFR4-211ENST00000509511 LUZP6Q538Z0 58 aa5.4□□□□□ -1.55
FGFR4-211ENST00000509511 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
FGFR4-211ENST00000509511 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
FGFR4-211ENST00000509511 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
FGFR4-211ENST00000509511 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
FGFR4-211ENST00000509511 MUC5ACP98088 5654 aa5.01□□□□□ -1.61
FGFR4-211ENST00000509511 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
FGFR4-211ENST00000509511 AHNAKQ09666 5890 aaKnown RBP4.98□□□□□ -1.61
FGFR4-211ENST00000509511 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
FGFR4-211ENST00000509511 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
FGFR4-211ENST00000509511 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
FGFR4-211ENST00000509511 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
FGFR4-211ENST00000509511 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
FGFR4-211ENST00000509511 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
FGFR4-211ENST00000509511 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
FGFR4-211ENST00000509511 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
FGFR4-211ENST00000509511 INE1O15225 51 aa4.21□□□□□ -1.73
FGFR4-211ENST00000509511 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.73
FGFR4-211ENST00000509511 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
FGFR4-211ENST00000509511 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
FGFR4-211ENST00000509511 H3BS24 57 aa4.04□□□□□ -1.76
FGFR4-211ENST00000509511 LCE1FQ5T754 118 aa3.96□□□□□ -1.77
FGFR4-211ENST00000509511 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
FGFR4-211ENST00000509511 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
FGFR4-211ENST00000509511 PRM1P04553 51 aa3.55□□□□□ -1.84
FGFR4-211ENST00000509511 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
FGFR4-211ENST00000509511 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
FGFR4-211ENST00000509511 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
FGFR4-211ENST00000509511 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 34.2 ms