RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
TOPBP1-207ENST00000509162 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
TOPBP1-207ENST00000509162 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
TOPBP1-207ENST00000509162 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
TOPBP1-207ENST00000509162 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
TOPBP1-207ENST00000509162 KRTAP12-1P59990 96 aa2.81□□□□□ -1.96
TOPBP1-207ENST00000509162 A0A0D9SG42 100 aa2.8□□□□□ -1.96
TOPBP1-207ENST00000509162 SPRR2EP22531 72 aa2.79□□□□□ -1.96
TOPBP1-207ENST00000509162 SPRR2BP35325 72 aa2.79□□□□□ -1.96
TOPBP1-207ENST00000509162 SPRR2AP35326 72 aa2.79□□□□□ -1.96
TOPBP1-207ENST00000509162 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
TOPBP1-207ENST00000509162 A0A1B0GU33 70 aa2.78□□□□□ -1.96
TOPBP1-207ENST00000509162 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
TOPBP1-207ENST00000509162 KRTAP19-7Q3SYF9 63 aa2.76□□□□□ -1.97
TOPBP1-207ENST00000509162 ATP5EP56381 51 aaPredicted RBP2.75□□□□□ -1.97
TOPBP1-207ENST00000509162 A0A1B0GU69 56 aa2.74□□□□□ -1.97
TOPBP1-207ENST00000509162 TMEM258P61165 79 aa2.74□□□□□ -1.97
TOPBP1-207ENST00000509162 SERP1Q9Y6X1 66 aa2.74□□□□□ -1.97
TOPBP1-207ENST00000509162 LINC01558Q9Y6Z2 57 aa2.73□□□□□ -1.97
TOPBP1-207ENST00000509162 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
TOPBP1-207ENST00000509162 MT1EP04732 61 aa2.71□□□□□ -1.98
TOPBP1-207ENST00000509162 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
TOPBP1-207ENST00000509162 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
TOPBP1-207ENST00000509162 SPRR2DP22532 72 aa2.68□□□□□ -1.98
TOPBP1-207ENST00000509162 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
TOPBP1-207ENST00000509162 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
TOPBP1-207ENST00000509162 LCE3EQ5T5B0 92 aa2.67□□□□□ -1.98
TOPBP1-207ENST00000509162 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
TOPBP1-207ENST00000509162 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
TOPBP1-207ENST00000509162 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
TOPBP1-207ENST00000509162 PRR15LQ9BU68 103 aa2.64□□□□□ -1.99
TOPBP1-207ENST00000509162 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
TOPBP1-207ENST00000509162 MT1LQ93083 61 aa2.59□□□□□ -1.99
TOPBP1-207ENST00000509162 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
TOPBP1-207ENST00000509162 K7ERS5 55 aa2.58□□□□□ -2
TOPBP1-207ENST00000509162 UQCR11O14957 56 aa2.57□□□□□ -2
TOPBP1-207ENST00000509162 Q1T7F1 81 aa2.57□□□□□ -2
TOPBP1-207ENST00000509162 MT1MQ8N339 61 aa2.57□□□□□ -2
TOPBP1-207ENST00000509162 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
TOPBP1-207ENST00000509162 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
TOPBP1-207ENST00000509162 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
TOPBP1-207ENST00000509162 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
TOPBP1-207ENST00000509162 TNP1P09430 55 aa2.54□□□□□ -2
TOPBP1-207ENST00000509162 MT1GP13640 62 aa2.52□□□□□ -2.01
TOPBP1-207ENST00000509162 A6NED7 52 aa2.48□□□□□ -2.01
TOPBP1-207ENST00000509162 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
TOPBP1-207ENST00000509162 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
TOPBP1-207ENST00000509162 KRTAP25-1Q3LHN0 102 aa2.47□□□□□ -2.01
TOPBP1-207ENST00000509162 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-207ENST00000509162 RPS28P62857 69 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-207ENST00000509162 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
TOPBP1-207ENST00000509162 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
TOPBP1-207ENST00000509162 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-207ENST00000509162 CDC42SE1Q9NRR8 79 aa2.37□□□□□ -2.03
TOPBP1-207ENST00000509162 MT4P47944 62 aa2.36□□□□□ -2.03
TOPBP1-207ENST00000509162 ROMO1P60602 79 aa2.34□□□□□ -2.03
TOPBP1-207ENST00000509162 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
TOPBP1-207ENST00000509162 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
TOPBP1-207ENST00000509162 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
TOPBP1-207ENST00000509162 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
TOPBP1-207ENST00000509162 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
TOPBP1-207ENST00000509162 KRTAP6-1Q3LI64 71 aa2.21□□□□□ -2.06
TOPBP1-207ENST00000509162 MT1AP04731 61 aa2.19□□□□□ -2.06
TOPBP1-207ENST00000509162 BRK1Q8WUW1 75 aa2.17□□□□□ -2.06
TOPBP1-207ENST00000509162 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
TOPBP1-207ENST00000509162 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
TOPBP1-207ENST00000509162 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
TOPBP1-207ENST00000509162 KTN1-AS1Q86SY8 53 aa2.06□□□□□ -2.08
TOPBP1-207ENST00000509162 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
TOPBP1-207ENST00000509162 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
TOPBP1-207ENST00000509162 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
TOPBP1-207ENST00000509162 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
TOPBP1-207ENST00000509162 INE1O15225 51 aa1.67□□□□□ -2.14
TOPBP1-207ENST00000509162 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
TOPBP1-207ENST00000509162 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
TOPBP1-207ENST00000509162 PRM1P04553 51 aa1.25□□□□□ -2.21
TOPBP1-207ENST00000509162 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
TOPBP1-207ENST00000509162 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 66 ms