RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 KRTAP10-10P60014 251 aa3.78□□□□□ -1.8
SSBP2-212ENST00000509053 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
SSBP2-212ENST00000509053 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
SSBP2-212ENST00000509053 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
SSBP2-212ENST00000509053 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
SSBP2-212ENST00000509053 USH2AO75445 5202 aa3.66□□□□□ -1.82
SSBP2-212ENST00000509053 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.82
SSBP2-212ENST00000509053 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
SSBP2-212ENST00000509053 MT1BP07438 61 aa3.59□□□□□ -1.84
SSBP2-212ENST00000509053 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
SSBP2-212ENST00000509053 MT3P25713 68 aa3.56□□□□□ -1.84
SSBP2-212ENST00000509053 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
SSBP2-212ENST00000509053 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
SSBP2-212ENST00000509053 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
SSBP2-212ENST00000509053 FCGBPQ9Y6R7 5405 aaPredicted RBP3.44□□□□□ -1.86
SSBP2-212ENST00000509053 MT1XP80297 61 aa3.42□□□□□ -1.86
SSBP2-212ENST00000509053 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
SSBP2-212ENST00000509053 TNP1P09430 55 aa3.39□□□□□ -1.87
SSBP2-212ENST00000509053 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
SSBP2-212ENST00000509053 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
SSBP2-212ENST00000509053 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SSBP2-212ENST00000509053 KMT2DO14686 5537 aa3.29□□□□□ -1.88
SSBP2-212ENST00000509053 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
SSBP2-212ENST00000509053 KRTAP10-12P60413 245 aa3.24□□□□□ -1.89
SSBP2-212ENST00000509053 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
SSBP2-212ENST00000509053 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
SSBP2-212ENST00000509053 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
SSBP2-212ENST00000509053 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
SSBP2-212ENST00000509053 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
SSBP2-212ENST00000509053 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
SSBP2-212ENST00000509053 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
SSBP2-212ENST00000509053 NEBP20929 6669 aa3.07□□□□□ -1.92
SSBP2-212ENST00000509053 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
SSBP2-212ENST00000509053 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
SSBP2-212ENST00000509053 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
SSBP2-212ENST00000509053 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SSBP2-212ENST00000509053 MT1EP04732 61 aa3.01□□□□□ -1.93
SSBP2-212ENST00000509053 SPRR2EP22531 72 aa2.96□□□□□ -1.94
SSBP2-212ENST00000509053 SPRR2BP35325 72 aa2.96□□□□□ -1.94
SSBP2-212ENST00000509053 SPRR2AP35326 72 aa2.96□□□□□ -1.94
SSBP2-212ENST00000509053 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
SSBP2-212ENST00000509053 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
SSBP2-212ENST00000509053 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
SSBP2-212ENST00000509053 MT1LQ93083 61 aa2.92□□□□□ -1.94
SSBP2-212ENST00000509053 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
SSBP2-212ENST00000509053 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
SSBP2-212ENST00000509053 MT1GP13640 62 aa2.85□□□□□ -1.95
SSBP2-212ENST00000509053 SPRR2DP22532 72 aa2.85□□□□□ -1.95
SSBP2-212ENST00000509053 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
SSBP2-212ENST00000509053 MT1MQ8N339 61 aa2.84□□□□□ -1.95
SSBP2-212ENST00000509053 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
SSBP2-212ENST00000509053 KRTAP12-4P60329 112 aa2.78□□□□□ -1.97
SSBP2-212ENST00000509053 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
SSBP2-212ENST00000509053 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
SSBP2-212ENST00000509053 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SSBP2-212ENST00000509053 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
SSBP2-212ENST00000509053 LCE1CQ5T751 118 aa2.58□□□□□ -2
SSBP2-212ENST00000509053 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
SSBP2-212ENST00000509053 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
SSBP2-212ENST00000509053 MT4P47944 62 aa2.5□□□□□ -2.01
SSBP2-212ENST00000509053 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
SSBP2-212ENST00000509053 MT1AP04731 61 aa2.47□□□□□ -2.01
SSBP2-212ENST00000509053 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
SSBP2-212ENST00000509053 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
SSBP2-212ENST00000509053 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
SSBP2-212ENST00000509053 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SSBP2-212ENST00000509053 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
SSBP2-212ENST00000509053 PRM1P04553 51 aa2.32□□□□□ -2.04
SSBP2-212ENST00000509053 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
SSBP2-212ENST00000509053 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SSBP2-212ENST00000509053 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
SSBP2-212ENST00000509053 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
SSBP2-212ENST00000509053 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
SSBP2-212ENST00000509053 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
SSBP2-212ENST00000509053 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SSBP2-212ENST00000509053 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
SSBP2-212ENST00000509053 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms