RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 KRTAP19-3Q7Z4W3 81 aa2.24□□□□□ -2.05
RACK1-220ENST00000508963 NEBP20929 6669 aa2.23□□□□□ -2.05
RACK1-220ENST00000508963 SPRR2EP22531 72 aa2.23□□□□□ -2.05
RACK1-220ENST00000508963 SPRR2BP35325 72 aa2.23□□□□□ -2.05
RACK1-220ENST00000508963 SPRR2AP35326 72 aa2.23□□□□□ -2.05
RACK1-220ENST00000508963 MT1GP13640 62 aa2.22□□□□□ -2.05
RACK1-220ENST00000508963 KRTAP15-1Q3LI76 137 aa2.21□□□□□ -2.06
RACK1-220ENST00000508963 PRAC1Q96KF2 57 aa2.21□□□□□ -2.06
RACK1-220ENST00000508963 KRTAP19-4Q3LI73 84 aa2.19□□□□□ -2.06
RACK1-220ENST00000508963 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
RACK1-220ENST00000508963 MT1MQ8N339 61 aa2.18□□□□□ -2.06
RACK1-220ENST00000508963 KRTAP4-7Q9BYR0 210 aa2.17□□□□□ -2.06
RACK1-220ENST00000508963 SPRR2DP22532 72 aa2.15□□□□□ -2.07
RACK1-220ENST00000508963 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
RACK1-220ENST00000508963 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
RACK1-220ENST00000508963 KRTAP4-6Q9BYQ5 205 aa2.14□□□□□ -2.07
RACK1-220ENST00000508963 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
RACK1-220ENST00000508963 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
RACK1-220ENST00000508963 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
RACK1-220ENST00000508963 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
RACK1-220ENST00000508963 LCE3BQ5TA77 95 aa2.09□□□□□ -2.07
RACK1-220ENST00000508963 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
RACK1-220ENST00000508963 KRTAP2-2Q9BYT5 123 aa2.07□□□□□ -2.08
RACK1-220ENST00000508963 KRTAP2-1Q9BYU5 128 aa2.07□□□□□ -2.08
RACK1-220ENST00000508963 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
RACK1-220ENST00000508963 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
RACK1-220ENST00000508963 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
RACK1-220ENST00000508963 SVIPQ8NHG7 77 aa2□□□□□ -2.09
RACK1-220ENST00000508963 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
RACK1-220ENST00000508963 LCE4AQ5TA78 99 aa1.94□□□□□ -2.1
RACK1-220ENST00000508963 MT1AP04731 61 aa1.91□□□□□ -2.1
RACK1-220ENST00000508963 KRTAP4-9Q9BYQ8 210 aa1.91□□□□□ -2.1
RACK1-220ENST00000508963 KRTAP6-1Q3LI64 71 aa1.9□□□□□ -2.11
RACK1-220ENST00000508963 SYNE1Q8NF91 8797 aaKnown RBP1.89□□□□□ -2.11
RACK1-220ENST00000508963 LCE1DQ5T752 114 aa1.89□□□□□ -2.11
RACK1-220ENST00000508963 MT4P47944 62 aa1.87□□□□□ -2.11
RACK1-220ENST00000508963 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
RACK1-220ENST00000508963 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
RACK1-220ENST00000508963 KRTAP9-4Q9BYQ2 154 aa1.84□□□□□ -2.11
RACK1-220ENST00000508963 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
RACK1-220ENST00000508963 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
RACK1-220ENST00000508963 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
RACK1-220ENST00000508963 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
RACK1-220ENST00000508963 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
RACK1-220ENST00000508963 KRTAP9-9Q9BYP9 154 aa1.75□□□□□ -2.13
RACK1-220ENST00000508963 MT3P25713 68 aa1.73□□□□□ -2.13
RACK1-220ENST00000508963 KRTAP4-12Q9BQ66 201 aa1.72□□□□□ -2.13
RACK1-220ENST00000508963 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
RACK1-220ENST00000508963 NDUFAF8A1L188 74 aa1.67□□□□□ -2.14
RACK1-220ENST00000508963 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
RACK1-220ENST00000508963 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
RACK1-220ENST00000508963 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
RACK1-220ENST00000508963 KRTAP4-11Q9BYQ6 195 aa1.63□□□□□ -2.15
RACK1-220ENST00000508963 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
RACK1-220ENST00000508963 KRTAP5-8O75690 187 aa1.58□□□□□ -2.16
RACK1-220ENST00000508963 LCE3DQ9BYE3 92 aa1.57□□□□□ -2.16
RACK1-220ENST00000508963 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
RACK1-220ENST00000508963 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
RACK1-220ENST00000508963 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
RACK1-220ENST00000508963 LCE3EQ5T5B0 92 aa1.51□□□□□ -2.17
RACK1-220ENST00000508963 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
RACK1-220ENST00000508963 LCE1CQ5T751 118 aa1.45□□□□□ -2.18
RACK1-220ENST00000508963 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
RACK1-220ENST00000508963 A0A0A0MQY5 61 aa1.41□□□□□ -2.18
RACK1-220ENST00000508963 INE1O15225 51 aa1.38□□□□□ -2.19
RACK1-220ENST00000508963 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
RACK1-220ENST00000508963 H3BS24 57 aa1.37□□□□□ -2.19
RACK1-220ENST00000508963 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
RACK1-220ENST00000508963 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
RACK1-220ENST00000508963 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
RACK1-220ENST00000508963 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
RACK1-220ENST00000508963 PRM1P04553 51 aa1.24□□□□□ -2.21
RACK1-220ENST00000508963 LCE1FQ5T754 118 aa1.2□□□□□ -2.22
RACK1-220ENST00000508963 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
RACK1-220ENST00000508963 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
RACK1-220ENST00000508963 MUC19Q7Z5P9 8384 aa0.98□□□□□ -2.25
RACK1-220ENST00000508963 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
RACK1-220ENST00000508963 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 78.5 ms