RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 A0A1B0GX51 115 aa0.67□□□□□ -2.3
TOPBP1-206ENST00000508524 MT-ATP8P03928 68 aa0.67□□□□□ -2.3
TOPBP1-206ENST00000508524 CASC2Q6XLA1 102 aa0.67□□□□□ -2.3
TOPBP1-206ENST00000508524 CDC42SE1Q9NRR8 79 aa0.67□□□□□ -2.3
TOPBP1-206ENST00000508524 ORMDL1Q9P0S3 153 aa0.67□□□□□ -2.3
TOPBP1-206ENST00000508524 LOC110117498A0A087WWA1 95 aa0.65□□□□□ -2.31
TOPBP1-206ENST00000508524 HIST1H2BKO60814 126 aa0.65□□□□□ -2.31
TOPBP1-206ENST00000508524 HIST1H2BJP06899 126 aa0.65□□□□□ -2.31
TOPBP1-206ENST00000508524 C20orf197Q8N268 126 aa0.65□□□□□ -2.31
TOPBP1-206ENST00000508524 C9JAW5 83 aa0.64□□□□□ -2.31
TOPBP1-206ENST00000508524 DNAL4O96015 105 aa0.64□□□□□ -2.31
TOPBP1-206ENST00000508524 INE1O15225 51 aa0.63□□□□□ -2.31
TOPBP1-206ENST00000508524 SNCGO76070 127 aa0.63□□□□□ -2.31
TOPBP1-206ENST00000508524 NREPQ16612 68 aa0.63□□□□□ -2.31
TOPBP1-206ENST00000508524 SNURFQ9Y675 71 aa0.63□□□□□ -2.31
TOPBP1-206ENST00000508524 KRTDAPP60985 99 aa0.62□□□□□ -2.31
TOPBP1-206ENST00000508524 F8W1H4 67 aa0.6□□□□□ -2.31
TOPBP1-206ENST00000508524 CLLU1Q5K131 121 aa0.6□□□□□ -2.31
TOPBP1-206ENST00000508524 PRO1854Q9UHT4 67 aa0.6□□□□□ -2.31
TOPBP1-206ENST00000508524 TSTD3H0UI37 97 aa0.59□□□□□ -2.31
TOPBP1-206ENST00000508524 ACYP1P07311 99 aa0.59□□□□□ -2.31
TOPBP1-206ENST00000508524 COX7CP15954 63 aa0.59□□□□□ -2.31
TOPBP1-206ENST00000508524 MIR22HGQ0VDD5 57 aa0.59□□□□□ -2.31
TOPBP1-206ENST00000508524 BRK1Q8WUW1 75 aa0.59□□□□□ -2.31
TOPBP1-206ENST00000508524 TRAV22A0A0B4J277 110 aa0.58□□□□□ -2.32
TOPBP1-206ENST00000508524 APOC3P02656 99 aa0.58□□□□□ -2.32
TOPBP1-206ENST00000508524 HIGD1BQ9P298 99 aa0.58□□□□□ -2.32
TOPBP1-206ENST00000508524 LOC101927531A0A1B0GV80 90 aa0.56□□□□□ -2.32
TOPBP1-206ENST00000508524 JMJD7-PLA2G4BH0Y9G9 81 aa0.56□□□□□ -2.32
TOPBP1-206ENST00000508524 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
TOPBP1-206ENST00000508524 TP53AIP1Q9HCN2 124 aa0.56□□□□□ -2.32
TOPBP1-206ENST00000508524 LOC105371267A0A1B0GV96 52 aa0.55□□□□□ -2.32
TOPBP1-206ENST00000508524 COX8AP10176 69 aa0.55□□□□□ -2.32
TOPBP1-206ENST00000508524 RPS28P62857 69 aaKnown RBP0.54□□□□□ -2.32
TOPBP1-206ENST00000508524 SVBPQ8N300 66 aa0.54□□□□□ -2.32
TOPBP1-206ENST00000508524 C14orf144Q96I85 54 aa0.54□□□□□ -2.32
TOPBP1-206ENST00000508524 TNP1P09430 55 aa0.53□□□□□ -2.32
TOPBP1-206ENST00000508524 SPCS1Q9Y6A9 102 aa0.53□□□□□ -2.32
TOPBP1-206ENST00000508524 DLEU1O43261 78 aa0.52□□□□□ -2.33
TOPBP1-206ENST00000508524 SCGB1A1P11684 91 aa0.52□□□□□ -2.33
TOPBP1-206ENST00000508524 DMAC1Q96GE9 116 aa0.52□□□□□ -2.33
TOPBP1-206ENST00000508524 H0Y9P7 68 aa0.51□□□□□ -2.33
TOPBP1-206ENST00000508524 UQCRQO14949 82 aa0.51□□□□□ -2.33
TOPBP1-206ENST00000508524 COX6CP09669 75 aa0.51□□□□□ -2.33
TOPBP1-206ENST00000508524 SPATA45Q537H7 98 aa0.51□□□□□ -2.33
TOPBP1-206ENST00000508524 SPATA8Q6RVD6 105 aa0.51□□□□□ -2.33
TOPBP1-206ENST00000508524 LINC00208Q96KT6 92 aa0.5□□□□□ -2.33
TOPBP1-206ENST00000508524 ATXN8Q156A1 80 aa0.49□□□□□ -2.33
TOPBP1-206ENST00000508524 ATOX1O00244 68 aa0.45□□□□□ -2.34
TOPBP1-206ENST00000508524 HSD52Q0P140 79 aa0.45□□□□□ -2.34
TOPBP1-206ENST00000508524 VAMP8Q9BV40 100 aa0.45□□□□□ -2.34
TOPBP1-206ENST00000508524 UBL5Q9BZL1 73 aa0.43□□□□□ -2.34
TOPBP1-206ENST00000508524 K7ERU9 68 aa0.4□□□□□ -2.35
TOPBP1-206ENST00000508524 ACYP2P14621 99 aa0.38□□□□□ -2.35
TOPBP1-206ENST00000508524 SPTSSBQ8NFR3 76 aa0.38□□□□□ -2.35
TOPBP1-206ENST00000508524 J3QR89 54 aa0.37□□□□□ -2.35
TOPBP1-206ENST00000508524 CHKB-CPT1BH3BT56 60 aa0.36□□□□□ -2.35
TOPBP1-206ENST00000508524 CCDC179H3BU77 68 aa0.34□□□□□ -2.36
TOPBP1-206ENST00000508524 PYY3Q5JQD4 70 aa0.34□□□□□ -2.36
TOPBP1-206ENST00000508524 UQCR10Q9UDW1 63 aa0.32□□□□□ -2.36
TOPBP1-206ENST00000508524 S100A1P23297 94 aa0.29□□□□□ -2.36
TOPBP1-206ENST00000508524 SERP1Q9Y6X1 66 aa0.29□□□□□ -2.36
TOPBP1-206ENST00000508524 A0A1B0GV90 55 aa0.28□□□□□ -2.36
TOPBP1-206ENST00000508524 M0R143 59 aa0.27□□□□□ -2.37
TOPBP1-206ENST00000508524 H7BZZ5 65 aa0.26□□□□□ -2.37
TOPBP1-206ENST00000508524 ETDBQ3ZM63 59 aa0.26□□□□□ -2.37
TOPBP1-206ENST00000508524 ATP5EP2Q5VTU8 51 aa0.26□□□□□ -2.37
TOPBP1-206ENST00000508524 PRR15LQ9BU68 103 aa0.26□□□□□ -2.37
TOPBP1-206ENST00000508524 SERP2Q8N6R1 65 aa0.25□□□□□ -2.37
TOPBP1-206ENST00000508524 A0A1B0GU69 56 aa0.21□□□□□ -2.38
TOPBP1-206ENST00000508524 LINC00643Q86TS7 51 aa0.2□□□□□ -2.38
TOPBP1-206ENST00000508524 SMIM6P0DI80 62 aa0.15□□□□□ -2.39
TOPBP1-206ENST00000508524 UQCR11O14957 56 aa0.11□□□□□ -2.39
TOPBP1-206ENST00000508524 LINC01558Q9Y6Z2 57 aa0.11□□□□□ -2.39
TOPBP1-206ENST00000508524 ATP5EP56381 51 aaPredicted RBP0.1□□□□□ -2.39
TOPBP1-206ENST00000508524 GTF2H5Q6ZYL4 71 aa0.09□□□□□ -2.4
TOPBP1-206ENST00000508524 COL5A1-AS1Q5SY13 56 aa0.08□□□□□ -2.4
TOPBP1-206ENST00000508524 PRM1P04553 51 aa0.05□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 79.5 ms