RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
SKP2-204ENST00000508514 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
SKP2-204ENST00000508514 A8MU10 97 aa6.18□□□□□ -1.42
SKP2-204ENST00000508514 H7BZZ5 65 aa6.16□□□□□ -1.42
SKP2-204ENST00000508514 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
SKP2-204ENST00000508514 COX7CP15954 63 aa6.14□□□□□ -1.43
SKP2-204ENST00000508514 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
SKP2-204ENST00000508514 TNP1P09430 55 aa6.08□□□□□ -1.44
SKP2-204ENST00000508514 A0A1B0GU69 56 aa6.07□□□□□ -1.44
SKP2-204ENST00000508514 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
SKP2-204ENST00000508514 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
SKP2-204ENST00000508514 KRTAP5-7Q6L8G8 165 aa5.93□□□□□ -1.46
SKP2-204ENST00000508514 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
SKP2-204ENST00000508514 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
SKP2-204ENST00000508514 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
SKP2-204ENST00000508514 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
SKP2-204ENST00000508514 H3BS24 57 aa5.77□□□□□ -1.49
SKP2-204ENST00000508514 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
SKP2-204ENST00000508514 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
SKP2-204ENST00000508514 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
SKP2-204ENST00000508514 ANAPC13Q9BS18 74 aa5.73□□□□□ -1.49
SKP2-204ENST00000508514 CCDC179H3BU77 68 aa5.72□□□□□ -1.49
SKP2-204ENST00000508514 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
SKP2-204ENST00000508514 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
SKP2-204ENST00000508514 UQCR11O14957 56 aa5.6□□□□□ -1.51
SKP2-204ENST00000508514 ATP5EP56381 51 aaPredicted RBP5.6□□□□□ -1.51
SKP2-204ENST00000508514 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
SKP2-204ENST00000508514 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
SKP2-204ENST00000508514 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
SKP2-204ENST00000508514 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
SKP2-204ENST00000508514 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
SKP2-204ENST00000508514 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
SKP2-204ENST00000508514 MT1AP04731 61 aa5.39□□□□□ -1.55
SKP2-204ENST00000508514 TMEM258P61165 79 aa5.39□□□□□ -1.55
SKP2-204ENST00000508514 K7ERS5 55 aa5.32□□□□□ -1.56
SKP2-204ENST00000508514 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
SKP2-204ENST00000508514 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
SKP2-204ENST00000508514 PSPHP1O15172 72 aa5.25□□□□□ -1.57
SKP2-204ENST00000508514 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
SKP2-204ENST00000508514 MUC5ACP98088 5654 aa5.16□□□□□ -1.58
SKP2-204ENST00000508514 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
SKP2-204ENST00000508514 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
SKP2-204ENST00000508514 Q1T7F1 81 aa5.15□□□□□ -1.59
SKP2-204ENST00000508514 MUC5BQ9HC84 5762 aaPredicted RBP5.14□□□□□ -1.59
SKP2-204ENST00000508514 V9GYY9 64 aa5.11□□□□□ -1.59
SKP2-204ENST00000508514 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
SKP2-204ENST00000508514 ROMO1P60602 79 aa5□□□□□ -1.61
SKP2-204ENST00000508514 A6NED7 52 aa4.99□□□□□ -1.61
SKP2-204ENST00000508514 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
SKP2-204ENST00000508514 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
SKP2-204ENST00000508514 MT3P25713 68 aa4.91□□□□□ -1.62
SKP2-204ENST00000508514 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
SKP2-204ENST00000508514 PCP4P48539 62 aa4.45□□□□□ -1.7
SKP2-204ENST00000508514 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
SKP2-204ENST00000508514 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
SKP2-204ENST00000508514 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
SKP2-204ENST00000508514 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
SKP2-204ENST00000508514 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
SKP2-204ENST00000508514 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
SKP2-204ENST00000508514 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
SKP2-204ENST00000508514 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
SKP2-204ENST00000508514 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
SKP2-204ENST00000508514 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
SKP2-204ENST00000508514 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
SKP2-204ENST00000508514 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
SKP2-204ENST00000508514 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
SKP2-204ENST00000508514 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
SKP2-204ENST00000508514 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
SKP2-204ENST00000508514 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
SKP2-204ENST00000508514 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
SKP2-204ENST00000508514 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
SKP2-204ENST00000508514 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
SKP2-204ENST00000508514 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
SKP2-204ENST00000508514 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
SKP2-204ENST00000508514 PRM1P04553 51 aa2.57□□□□□ -2
SKP2-204ENST00000508514 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
SKP2-204ENST00000508514 INE1O15225 51 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 109.9 ms