RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 MT1EP04732 61 aa4.62□□□□□ -1.67
PTPN20-218ENST00000508357 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
PTPN20-218ENST00000508357 SPRR2DP22532 72 aa4.62□□□□□ -1.67
PTPN20-218ENST00000508357 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
PTPN20-218ENST00000508357 PSPHP1O15172 72 aa4.58□□□□□ -1.68
PTPN20-218ENST00000508357 Q1T7F1 81 aa4.58□□□□□ -1.68
PTPN20-218ENST00000508357 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
PTPN20-218ENST00000508357 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
PTPN20-218ENST00000508357 PCP4P48539 62 aa4.55□□□□□ -1.68
PTPN20-218ENST00000508357 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
PTPN20-218ENST00000508357 V9GYY9 64 aa4.54□□□□□ -1.68
PTPN20-218ENST00000508357 TNP1P09430 55 aa4.52□□□□□ -1.69
PTPN20-218ENST00000508357 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
PTPN20-218ENST00000508357 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
PTPN20-218ENST00000508357 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
PTPN20-218ENST00000508357 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
PTPN20-218ENST00000508357 MT1LQ93083 61 aa4.43□□□□□ -1.7
PTPN20-218ENST00000508357 A6NED7 52 aa4.39□□□□□ -1.71
PTPN20-218ENST00000508357 MT1GP13640 62 aa4.38□□□□□ -1.71
PTPN20-218ENST00000508357 MT1MQ8N339 61 aa4.37□□□□□ -1.71
PTPN20-218ENST00000508357 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
PTPN20-218ENST00000508357 K7ERS5 55 aa4.35□□□□□ -1.71
PTPN20-218ENST00000508357 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
PTPN20-218ENST00000508357 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
PTPN20-218ENST00000508357 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
PTPN20-218ENST00000508357 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
PTPN20-218ENST00000508357 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
PTPN20-218ENST00000508357 ROMO1P60602 79 aa4.17□□□□□ -1.74
PTPN20-218ENST00000508357 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
PTPN20-218ENST00000508357 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
PTPN20-218ENST00000508357 MT4P47944 62 aa4.04□□□□□ -1.76
PTPN20-218ENST00000508357 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
PTPN20-218ENST00000508357 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
PTPN20-218ENST00000508357 MT3P25713 68 aa4□□□□□ -1.77
PTPN20-218ENST00000508357 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
PTPN20-218ENST00000508357 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
PTPN20-218ENST00000508357 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
PTPN20-218ENST00000508357 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
PTPN20-218ENST00000508357 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
PTPN20-218ENST00000508357 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
PTPN20-218ENST00000508357 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
PTPN20-218ENST00000508357 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
PTPN20-218ENST00000508357 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
PTPN20-218ENST00000508357 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
PTPN20-218ENST00000508357 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
PTPN20-218ENST00000508357 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
PTPN20-218ENST00000508357 MT1AP04731 61 aa3.76□□□□□ -1.81
PTPN20-218ENST00000508357 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
PTPN20-218ENST00000508357 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PTPN20-218ENST00000508357 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
PTPN20-218ENST00000508357 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
PTPN20-218ENST00000508357 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
PTPN20-218ENST00000508357 PRAC1Q96KF2 57 aa3.61□□□□□ -1.83
PTPN20-218ENST00000508357 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
PTPN20-218ENST00000508357 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
PTPN20-218ENST00000508357 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
PTPN20-218ENST00000508357 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
PTPN20-218ENST00000508357 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
PTPN20-218ENST00000508357 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
PTPN20-218ENST00000508357 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
PTPN20-218ENST00000508357 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
PTPN20-218ENST00000508357 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
PTPN20-218ENST00000508357 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
PTPN20-218ENST00000508357 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
PTPN20-218ENST00000508357 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
PTPN20-218ENST00000508357 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
PTPN20-218ENST00000508357 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
PTPN20-218ENST00000508357 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PTPN20-218ENST00000508357 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
PTPN20-218ENST00000508357 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
PTPN20-218ENST00000508357 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
PTPN20-218ENST00000508357 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
PTPN20-218ENST00000508357 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
PTPN20-218ENST00000508357 PRM1P04553 51 aa2.17□□□□□ -2.06
PTPN20-218ENST00000508357 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
PTPN20-218ENST00000508357 INE1O15225 51 aa2.09□□□□□ -2.07
PTPN20-218ENST00000508357 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
PTPN20-218ENST00000508357 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms