RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 TMEM258P61165 79 aa3.51□□□□□ -1.85
DDX41-209ENST00000508279 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
DDX41-209ENST00000508279 SVIPQ8NHG7 77 aa3.5□□□□□ -1.85
DDX41-209ENST00000508279 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
DDX41-209ENST00000508279 MT1EP04732 61 aa3.48□□□□□ -1.85
DDX41-209ENST00000508279 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
DDX41-209ENST00000508279 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
DDX41-209ENST00000508279 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
DDX41-209ENST00000508279 TNP1P09430 55 aa3.44□□□□□ -1.86
DDX41-209ENST00000508279 UQCR11O14957 56 aa3.43□□□□□ -1.86
DDX41-209ENST00000508279 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
DDX41-209ENST00000508279 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
DDX41-209ENST00000508279 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
DDX41-209ENST00000508279 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
DDX41-209ENST00000508279 MT1GP13640 62 aa3.36□□□□□ -1.87
DDX41-209ENST00000508279 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
DDX41-209ENST00000508279 PSPHP1O15172 72 aa3.35□□□□□ -1.87
DDX41-209ENST00000508279 MT1LQ93083 61 aa3.34□□□□□ -1.87
DDX41-209ENST00000508279 MT1MQ8N339 61 aa3.32□□□□□ -1.88
DDX41-209ENST00000508279 V9GYY9 64 aa3.32□□□□□ -1.88
DDX41-209ENST00000508279 K7ERS5 55 aa3.31□□□□□ -1.88
DDX41-209ENST00000508279 Q1T7F1 81 aa3.28□□□□□ -1.88
DDX41-209ENST00000508279 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
DDX41-209ENST00000508279 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
DDX41-209ENST00000508279 PCP4P48539 62 aa3.26□□□□□ -1.89
DDX41-209ENST00000508279 A6NED7 52 aa3.24□□□□□ -1.89
DDX41-209ENST00000508279 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
DDX41-209ENST00000508279 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
DDX41-209ENST00000508279 MT4P47944 62 aa3.2□□□□□ -1.9
DDX41-209ENST00000508279 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
DDX41-209ENST00000508279 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
DDX41-209ENST00000508279 RPS28P62857 69 aaKnown RBP3.11□□□□□ -1.91
DDX41-209ENST00000508279 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
DDX41-209ENST00000508279 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
DDX41-209ENST00000508279 ROMO1P60602 79 aa3.07□□□□□ -1.92
DDX41-209ENST00000508279 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
DDX41-209ENST00000508279 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
DDX41-209ENST00000508279 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
DDX41-209ENST00000508279 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
DDX41-209ENST00000508279 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
DDX41-209ENST00000508279 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
DDX41-209ENST00000508279 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
DDX41-209ENST00000508279 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
DDX41-209ENST00000508279 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
DDX41-209ENST00000508279 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
DDX41-209ENST00000508279 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
DDX41-209ENST00000508279 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
DDX41-209ENST00000508279 MT1AP04731 61 aa2.83□□□□□ -1.96
DDX41-209ENST00000508279 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
DDX41-209ENST00000508279 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
DDX41-209ENST00000508279 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
DDX41-209ENST00000508279 MT3P25713 68 aa2.74□□□□□ -1.97
DDX41-209ENST00000508279 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
DDX41-209ENST00000508279 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
DDX41-209ENST00000508279 PMAIP1Q13794 54 aa2.64□□□□□ -1.99
DDX41-209ENST00000508279 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
DDX41-209ENST00000508279 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
DDX41-209ENST00000508279 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
DDX41-209ENST00000508279 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
DDX41-209ENST00000508279 KRTAP5-8O75690 187 aa2.58□□□□□ -2
DDX41-209ENST00000508279 LCE1FQ5T754 118 aa2.55□□□□□ -2
DDX41-209ENST00000508279 NDUFAF8A1L188 74 aa2.53□□□□□ -2
DDX41-209ENST00000508279 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
DDX41-209ENST00000508279 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
DDX41-209ENST00000508279 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
DDX41-209ENST00000508279 KTN1-AS1Q86SY8 53 aa2.33□□□□□ -2.04
DDX41-209ENST00000508279 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
DDX41-209ENST00000508279 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
DDX41-209ENST00000508279 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
DDX41-209ENST00000508279 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
DDX41-209ENST00000508279 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
DDX41-209ENST00000508279 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
DDX41-209ENST00000508279 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
DDX41-209ENST00000508279 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
DDX41-209ENST00000508279 PRM1P04553 51 aa1.6□□□□□ -2.15
DDX41-209ENST00000508279 INE1O15225 51 aa1.35□□□□□ -2.19
DDX41-209ENST00000508279 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
DDX41-209ENST00000508279 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 66 ms