RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
SPSB4-203ENST00000508126 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
SPSB4-203ENST00000508126 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
SPSB4-203ENST00000508126 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
SPSB4-203ENST00000508126 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SPSB4-203ENST00000508126 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
SPSB4-203ENST00000508126 MT1GP13640 62 aa5.63□□□□□ -1.51
SPSB4-203ENST00000508126 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
SPSB4-203ENST00000508126 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
SPSB4-203ENST00000508126 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
SPSB4-203ENST00000508126 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
SPSB4-203ENST00000508126 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
SPSB4-203ENST00000508126 MT1MQ8N339 61 aa5.56□□□□□ -1.52
SPSB4-203ENST00000508126 SPRR2EP22531 72 aa5.55□□□□□ -1.52
SPSB4-203ENST00000508126 SPRR2BP35325 72 aa5.55□□□□□ -1.52
SPSB4-203ENST00000508126 SPRR2AP35326 72 aa5.55□□□□□ -1.52
SPSB4-203ENST00000508126 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
SPSB4-203ENST00000508126 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
SPSB4-203ENST00000508126 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
SPSB4-203ENST00000508126 KRTAP9-6A8MVA2 160 aa5.37□□□□□ -1.55
SPSB4-203ENST00000508126 NEBP20929 6669 aa5.35□□□□□ -1.55
SPSB4-203ENST00000508126 SPRR2DP22532 72 aa5.34□□□□□ -1.55
SPSB4-203ENST00000508126 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
SPSB4-203ENST00000508126 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
SPSB4-203ENST00000508126 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
SPSB4-203ENST00000508126 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
SPSB4-203ENST00000508126 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
SPSB4-203ENST00000508126 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
SPSB4-203ENST00000508126 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
SPSB4-203ENST00000508126 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
SPSB4-203ENST00000508126 MT1AP04731 61 aa4.92□□□□□ -1.62
SPSB4-203ENST00000508126 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
SPSB4-203ENST00000508126 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
SPSB4-203ENST00000508126 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
SPSB4-203ENST00000508126 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
SPSB4-203ENST00000508126 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
SPSB4-203ENST00000508126 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
SPSB4-203ENST00000508126 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
SPSB4-203ENST00000508126 MT4P47944 62 aa4.63□□□□□ -1.67
SPSB4-203ENST00000508126 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
SPSB4-203ENST00000508126 KRTAP4-6Q9BYQ5 205 aa4.57□□□□□ -1.68
SPSB4-203ENST00000508126 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
SPSB4-203ENST00000508126 INE1O15225 51 aa4.52□□□□□ -1.69
SPSB4-203ENST00000508126 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
SPSB4-203ENST00000508126 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
SPSB4-203ENST00000508126 MT3P25713 68 aa4.48□□□□□ -1.69
SPSB4-203ENST00000508126 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
SPSB4-203ENST00000508126 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
SPSB4-203ENST00000508126 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
SPSB4-203ENST00000508126 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
SPSB4-203ENST00000508126 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
SPSB4-203ENST00000508126 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
SPSB4-203ENST00000508126 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SPSB4-203ENST00000508126 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
SPSB4-203ENST00000508126 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.78
SPSB4-203ENST00000508126 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
SPSB4-203ENST00000508126 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
SPSB4-203ENST00000508126 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SPSB4-203ENST00000508126 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
SPSB4-203ENST00000508126 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
SPSB4-203ENST00000508126 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
SPSB4-203ENST00000508126 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
SPSB4-203ENST00000508126 PRM1P04553 51 aa3.62□□□□□ -1.83
SPSB4-203ENST00000508126 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
SPSB4-203ENST00000508126 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
SPSB4-203ENST00000508126 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
SPSB4-203ENST00000508126 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
SPSB4-203ENST00000508126 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
SPSB4-203ENST00000508126 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
SPSB4-203ENST00000508126 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
SPSB4-203ENST00000508126 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
SPSB4-203ENST00000508126 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
SPSB4-203ENST00000508126 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SPSB4-203ENST00000508126 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SPSB4-203ENST00000508126 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SPSB4-203ENST00000508126 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SPSB4-203ENST00000508126 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SPSB4-203ENST00000508126 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 63 ms