RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SEC61GP60059 68 aa3.6□□□□□ -1.83
CAST-220ENST00000508117 P0C880 135 aa3.57□□□□□ -1.84
CAST-220ENST00000508117 R4GN34 69 aa3.56□□□□□ -1.84
CAST-220ENST00000508117 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
CAST-220ENST00000508117 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
CAST-220ENST00000508117 PSPHP1O15172 72 aa3.53□□□□□ -1.84
CAST-220ENST00000508117 A0A1B0GU33 70 aa3.51□□□□□ -1.85
CAST-220ENST00000508117 M0QZ58 72 aa3.5□□□□□ -1.85
CAST-220ENST00000508117 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
CAST-220ENST00000508117 UQCR11O14957 56 aa3.48□□□□□ -1.85
CAST-220ENST00000508117 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
CAST-220ENST00000508117 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CAST-220ENST00000508117 KRTAP19-3Q7Z4W3 81 aa3.48□□□□□ -1.85
CAST-220ENST00000508117 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
CAST-220ENST00000508117 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
CAST-220ENST00000508117 MT4P47944 62 aa3.46□□□□□ -1.86
CAST-220ENST00000508117 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
CAST-220ENST00000508117 A6NED7 52 aa3.45□□□□□ -1.86
CAST-220ENST00000508117 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CAST-220ENST00000508117 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
CAST-220ENST00000508117 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
CAST-220ENST00000508117 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
CAST-220ENST00000508117 LINC01554Q52M75 96 aa3.43□□□□□ -1.86
CAST-220ENST00000508117 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
CAST-220ENST00000508117 MT1EP04732 61 aa3.41□□□□□ -1.86
CAST-220ENST00000508117 CDC42SE1Q9NRR8 79 aa3.41□□□□□ -1.86
CAST-220ENST00000508117 A8MU10 97 aa3.39□□□□□ -1.87
CAST-220ENST00000508117 A0A0D9SG42 100 aa3.37□□□□□ -1.87
CAST-220ENST00000508117 MT1GP13640 62 aa3.37□□□□□ -1.87
CAST-220ENST00000508117 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
CAST-220ENST00000508117 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
CAST-220ENST00000508117 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
CAST-220ENST00000508117 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
CAST-220ENST00000508117 K7ERS5 55 aa3.3□□□□□ -1.88
CAST-220ENST00000508117 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
CAST-220ENST00000508117 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
CAST-220ENST00000508117 MT1MQ8N339 61 aa3.27□□□□□ -1.89
CAST-220ENST00000508117 CAMK2N1Q7Z7J9 78 aa3.25□□□□□ -1.89
CAST-220ENST00000508117 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
CAST-220ENST00000508117 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.9
CAST-220ENST00000508117 MT1LQ93083 61 aa3.2□□□□□ -1.9
CAST-220ENST00000508117 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
CAST-220ENST00000508117 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
CAST-220ENST00000508117 ROMO1P60602 79 aa3.15□□□□□ -1.91
CAST-220ENST00000508117 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
CAST-220ENST00000508117 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
CAST-220ENST00000508117 PMAIP1Q13794 54 aa3.12□□□□□ -1.91
CAST-220ENST00000508117 TNP1P09430 55 aa3.1□□□□□ -1.91
CAST-220ENST00000508117 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
CAST-220ENST00000508117 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
CAST-220ENST00000508117 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
CAST-220ENST00000508117 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
CAST-220ENST00000508117 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
CAST-220ENST00000508117 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
CAST-220ENST00000508117 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
CAST-220ENST00000508117 SVIPQ8NHG7 77 aa3.02□□□□□ -1.93
CAST-220ENST00000508117 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CAST-220ENST00000508117 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
CAST-220ENST00000508117 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
CAST-220ENST00000508117 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
CAST-220ENST00000508117 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
CAST-220ENST00000508117 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
CAST-220ENST00000508117 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
CAST-220ENST00000508117 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
CAST-220ENST00000508117 MT1AP04731 61 aa2.73□□□□□ -1.97
CAST-220ENST00000508117 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
CAST-220ENST00000508117 KRTAP6-2Q3LI66 62 aa2.66□□□□□ -1.98
CAST-220ENST00000508117 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
CAST-220ENST00000508117 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
CAST-220ENST00000508117 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
CAST-220ENST00000508117 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CAST-220ENST00000508117 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
CAST-220ENST00000508117 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CAST-220ENST00000508117 INE1O15225 51 aa1.93□□□□□ -2.1
CAST-220ENST00000508117 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CAST-220ENST00000508117 PRM1P04553 51 aa1.63□□□□□ -2.15
CAST-220ENST00000508117 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
CAST-220ENST00000508117 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 144.1 ms