RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 CHKB-CPT1BH3BT56 60 aa4.15□□□□□ -1.75
PDGFRA-205ENST00000507536 H0Y9P7 68 aa4.14□□□□□ -1.75
PDGFRA-205ENST00000507536 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
PDGFRA-205ENST00000507536 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
PDGFRA-205ENST00000507536 R4GN34 69 aa4.12□□□□□ -1.75
PDGFRA-205ENST00000507536 A6NED7 52 aa4.11□□□□□ -1.75
PDGFRA-205ENST00000507536 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
PDGFRA-205ENST00000507536 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
PDGFRA-205ENST00000507536 M0QZ58 72 aa4.09□□□□□ -1.75
PDGFRA-205ENST00000507536 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
PDGFRA-205ENST00000507536 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
PDGFRA-205ENST00000507536 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
PDGFRA-205ENST00000507536 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
PDGFRA-205ENST00000507536 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
PDGFRA-205ENST00000507536 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
PDGFRA-205ENST00000507536 COA5Q86WW8 74 aa4.03□□□□□ -1.76
PDGFRA-205ENST00000507536 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
PDGFRA-205ENST00000507536 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
PDGFRA-205ENST00000507536 A8MU10 97 aa3.98□□□□□ -1.77
PDGFRA-205ENST00000507536 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
PDGFRA-205ENST00000507536 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
PDGFRA-205ENST00000507536 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
PDGFRA-205ENST00000507536 ACYP2P14621 99 aa3.88□□□□□ -1.79
PDGFRA-205ENST00000507536 MT1EP04732 61 aa3.87□□□□□ -1.79
PDGFRA-205ENST00000507536 SPATA8Q6RVD6 105 aa3.86□□□□□ -1.79
PDGFRA-205ENST00000507536 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
PDGFRA-205ENST00000507536 A0A1B0GU69 56 aa3.84□□□□□ -1.79
PDGFRA-205ENST00000507536 UQCR11O14957 56 aa3.83□□□□□ -1.8
PDGFRA-205ENST00000507536 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
PDGFRA-205ENST00000507536 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
PDGFRA-205ENST00000507536 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
PDGFRA-205ENST00000507536 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
PDGFRA-205ENST00000507536 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
PDGFRA-205ENST00000507536 MT4P47944 62 aa3.73□□□□□ -1.81
PDGFRA-205ENST00000507536 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
PDGFRA-205ENST00000507536 MT1GP13640 62 aa3.72□□□□□ -1.81
PDGFRA-205ENST00000507536 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
PDGFRA-205ENST00000507536 ROMO1P60602 79 aa3.7□□□□□ -1.82
PDGFRA-205ENST00000507536 MT1MQ8N339 61 aa3.7□□□□□ -1.82
PDGFRA-205ENST00000507536 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
PDGFRA-205ENST00000507536 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
PDGFRA-205ENST00000507536 A0A0D9SG42 100 aa3.67□□□□□ -1.82
PDGFRA-205ENST00000507536 KRTAP25-1Q3LHN0 102 aa3.67□□□□□ -1.82
PDGFRA-205ENST00000507536 MT1LQ93083 61 aa3.66□□□□□ -1.82
PDGFRA-205ENST00000507536 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
PDGFRA-205ENST00000507536 K7ERS5 55 aa3.64□□□□□ -1.83
PDGFRA-205ENST00000507536 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
PDGFRA-205ENST00000507536 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
PDGFRA-205ENST00000507536 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
PDGFRA-205ENST00000507536 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
PDGFRA-205ENST00000507536 A0A1B0GU33 70 aa3.55□□□□□ -1.84
PDGFRA-205ENST00000507536 C10orf95Q9H7T3 257 aa3.53□□□□□ -1.84
PDGFRA-205ENST00000507536 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
PDGFRA-205ENST00000507536 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
PDGFRA-205ENST00000507536 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
PDGFRA-205ENST00000507536 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
PDGFRA-205ENST00000507536 TNP1P09430 55 aa3.38□□□□□ -1.87
PDGFRA-205ENST00000507536 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
PDGFRA-205ENST00000507536 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
PDGFRA-205ENST00000507536 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
PDGFRA-205ENST00000507536 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
PDGFRA-205ENST00000507536 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
PDGFRA-205ENST00000507536 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
PDGFRA-205ENST00000507536 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
PDGFRA-205ENST00000507536 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
PDGFRA-205ENST00000507536 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
PDGFRA-205ENST00000507536 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
PDGFRA-205ENST00000507536 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
PDGFRA-205ENST00000507536 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
PDGFRA-205ENST00000507536 MT1AP04731 61 aa3.09□□□□□ -1.91
PDGFRA-205ENST00000507536 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
PDGFRA-205ENST00000507536 INE1O15225 51 aa2.95□□□□□ -1.94
PDGFRA-205ENST00000507536 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
PDGFRA-205ENST00000507536 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
PDGFRA-205ENST00000507536 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PDGFRA-205ENST00000507536 PRM1P04553 51 aa1.83□□□□□ -2.12
PDGFRA-205ENST00000507536 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
PDGFRA-205ENST00000507536 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 57 ms