RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
TRIM6-209ENST00000507320 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
TRIM6-209ENST00000507320 INE1O15225 51 aa4.3□□□□□ -1.72
TRIM6-209ENST00000507320 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
TRIM6-209ENST00000507320 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
TRIM6-209ENST00000507320 KMT2DO14686 5537 aa4.27□□□□□ -1.73
TRIM6-209ENST00000507320 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
TRIM6-209ENST00000507320 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
TRIM6-209ENST00000507320 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
TRIM6-209ENST00000507320 TNP1P09430 55 aa4.12□□□□□ -1.75
TRIM6-209ENST00000507320 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
TRIM6-209ENST00000507320 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
TRIM6-209ENST00000507320 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
TRIM6-209ENST00000507320 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
TRIM6-209ENST00000507320 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
TRIM6-209ENST00000507320 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
TRIM6-209ENST00000507320 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
TRIM6-209ENST00000507320 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
TRIM6-209ENST00000507320 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
TRIM6-209ENST00000507320 MT1EP04732 61 aa3.94□□□□□ -1.78
TRIM6-209ENST00000507320 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
TRIM6-209ENST00000507320 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
TRIM6-209ENST00000507320 NEBP20929 6669 aa3.91□□□□□ -1.78
TRIM6-209ENST00000507320 SPRR2EP22531 72 aa3.91□□□□□ -1.78
TRIM6-209ENST00000507320 SPRR2BP35325 72 aa3.91□□□□□ -1.78
TRIM6-209ENST00000507320 SPRR2AP35326 72 aa3.91□□□□□ -1.78
TRIM6-209ENST00000507320 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
TRIM6-209ENST00000507320 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
TRIM6-209ENST00000507320 MT1LQ93083 61 aa3.81□□□□□ -1.8
TRIM6-209ENST00000507320 SPRR2DP22532 72 aa3.76□□□□□ -1.81
TRIM6-209ENST00000507320 MT1GP13640 62 aa3.76□□□□□ -1.81
TRIM6-209ENST00000507320 MT1MQ8N339 61 aa3.72□□□□□ -1.81
TRIM6-209ENST00000507320 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
TRIM6-209ENST00000507320 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
TRIM6-209ENST00000507320 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
TRIM6-209ENST00000507320 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
TRIM6-209ENST00000507320 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
TRIM6-209ENST00000507320 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
TRIM6-209ENST00000507320 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
TRIM6-209ENST00000507320 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
TRIM6-209ENST00000507320 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
TRIM6-209ENST00000507320 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
TRIM6-209ENST00000507320 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
TRIM6-209ENST00000507320 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
TRIM6-209ENST00000507320 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
TRIM6-209ENST00000507320 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
TRIM6-209ENST00000507320 MT4P47944 62 aa3.3□□□□□ -1.88
TRIM6-209ENST00000507320 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
TRIM6-209ENST00000507320 MT1AP04731 61 aa3.23□□□□□ -1.89
TRIM6-209ENST00000507320 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
TRIM6-209ENST00000507320 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
TRIM6-209ENST00000507320 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
TRIM6-209ENST00000507320 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
TRIM6-209ENST00000507320 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
TRIM6-209ENST00000507320 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.9
TRIM6-209ENST00000507320 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
TRIM6-209ENST00000507320 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
TRIM6-209ENST00000507320 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
TRIM6-209ENST00000507320 MT3P25713 68 aa2.93□□□□□ -1.94
TRIM6-209ENST00000507320 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
TRIM6-209ENST00000507320 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
TRIM6-209ENST00000507320 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
TRIM6-209ENST00000507320 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
TRIM6-209ENST00000507320 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
TRIM6-209ENST00000507320 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
TRIM6-209ENST00000507320 MUC5ACP98088 5654 aa2.54□□□□□ -2
TRIM6-209ENST00000507320 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
TRIM6-209ENST00000507320 PRM1P04553 51 aa2.5□□□□□ -2.01
TRIM6-209ENST00000507320 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
TRIM6-209ENST00000507320 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
TRIM6-209ENST00000507320 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
TRIM6-209ENST00000507320 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
TRIM6-209ENST00000507320 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
TRIM6-209ENST00000507320 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
TRIM6-209ENST00000507320 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
TRIM6-209ENST00000507320 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
TRIM6-209ENST00000507320 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 31.1 ms