RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 Q5VV11 94 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 BRK1Q8WUW1 75 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 CDC42SE1Q9NRR8 79 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 TNXBP22105 4242 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 LRP1Q07954 4544 aaKnown RBP1.03□□□□□ -2.24
TOPBP1-205ENST00000506779 FAT3Q8TDW7 4589 aa1.03□□□□□ -2.24
TOPBP1-205ENST00000506779 M0QZ58 72 aa1.03□□□□□ -2.24
TOPBP1-205ENST00000506779 MIR22HGQ0VDD5 57 aa1.03□□□□□ -2.24
TOPBP1-205ENST00000506779 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
TOPBP1-205ENST00000506779 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
TOPBP1-205ENST00000506779 SYNE2Q8WXH0 6885 aaKnown RBP1.01□□□□□ -2.25
TOPBP1-205ENST00000506779 M0R2T5 61 aa1.01□□□□□ -2.25
TOPBP1-205ENST00000506779 PMAIP1Q13794 54 aa1.01□□□□□ -2.25
TOPBP1-205ENST00000506779 NEBP20929 6669 aa0.98□□□□□ -2.25
TOPBP1-205ENST00000506779 A6NN06 94 aa0.98□□□□□ -2.25
TOPBP1-205ENST00000506779 KRTAP19-2Q3LHN2 52 aa0.98□□□□□ -2.25
TOPBP1-205ENST00000506779 LPAP08519 4548 aa0.97□□□□□ -2.25
TOPBP1-205ENST00000506779 A0A0D9SG42 100 aa0.97□□□□□ -2.25
TOPBP1-205ENST00000506779 KRTAP12-1P59990 96 aa0.97□□□□□ -2.25
TOPBP1-205ENST00000506779 MT1HP80294 61 aa0.96□□□□□ -2.26
TOPBP1-205ENST00000506779 LINC01554Q52M75 96 aa0.96□□□□□ -2.26
TOPBP1-205ENST00000506779 KTN1-AS1Q86SY8 53 aa0.96□□□□□ -2.26
TOPBP1-205ENST00000506779 ROMO1P60602 79 aa0.95□□□□□ -2.26
TOPBP1-205ENST00000506779 PLAC4Q8WY50 150 aa0.95□□□□□ -2.26
TOPBP1-205ENST00000506779 MUC17Q685J3 4493 aa0.95□□□□□ -2.26
TOPBP1-205ENST00000506779 KRTAP13-4Q3LI77 160 aa0.94□□□□□ -2.26
TOPBP1-205ENST00000506779 SPRR2GQ9BYE4 73 aa0.94□□□□□ -2.26
TOPBP1-205ENST00000506779 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
TOPBP1-205ENST00000506779 SSPOA2VEC9 5147 aa0.93□□□□□ -2.26
TOPBP1-205ENST00000506779 MACF1Q9UPN3 7388 aaKnown RBP0.93□□□□□ -2.26
TOPBP1-205ENST00000506779 USH2AO75445 5202 aa0.92□□□□□ -2.26
TOPBP1-205ENST00000506779 MT2AP02795 61 aa0.92□□□□□ -2.26
TOPBP1-205ENST00000506779 PRO2289Q9P1D8 64 aa0.92□□□□□ -2.26
TOPBP1-205ENST00000506779 MT1FP04733 61 aa0.91□□□□□ -2.26
TOPBP1-205ENST00000506779 TNP1P09430 55 aa0.91□□□□□ -2.26
TOPBP1-205ENST00000506779 KRTAP19-8Q3LI54 63 aa0.9□□□□□ -2.27
TOPBP1-205ENST00000506779 C10orf95Q9H7T3 257 aa0.88□□□□□ -2.27
TOPBP1-205ENST00000506779 MDN1Q9NU22 5596 aa0.87□□□□□ -2.27
TOPBP1-205ENST00000506779 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
TOPBP1-205ENST00000506779 FLGP20930 4061 aaPredicted RBP0.86□□□□□ -2.27
TOPBP1-205ENST00000506779 MT1BP07438 61 aa0.86□□□□□ -2.27
TOPBP1-205ENST00000506779 KMT2DO14686 5537 aa0.85□□□□□ -2.27
TOPBP1-205ENST00000506779 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
TOPBP1-205ENST00000506779 MT1XP80297 61 aa0.84□□□□□ -2.27
TOPBP1-205ENST00000506779 KRTAP19-6Q3LI70 58 aa0.82□□□□□ -2.28
TOPBP1-205ENST00000506779 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
TOPBP1-205ENST00000506779 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
TOPBP1-205ENST00000506779 DSTQ03001 7570 aaKnown RBP0.77□□□□□ -2.29
TOPBP1-205ENST00000506779 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
TOPBP1-205ENST00000506779 KRTAP20-1Q3LI63 56 aa0.76□□□□□ -2.29
TOPBP1-205ENST00000506779 KRTAP19-7Q3SYF9 63 aa0.75□□□□□ -2.29
TOPBP1-205ENST00000506779 MT1EP04732 61 aa0.74□□□□□ -2.29
TOPBP1-205ENST00000506779 MT1GP13640 62 aa0.74□□□□□ -2.29
TOPBP1-205ENST00000506779 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
TOPBP1-205ENST00000506779 MT1LQ93083 61 aa0.73□□□□□ -2.29
TOPBP1-205ENST00000506779 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
TOPBP1-205ENST00000506779 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
TOPBP1-205ENST00000506779 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
TOPBP1-205ENST00000506779 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
TOPBP1-205ENST00000506779 SPRR2EP22531 72 aa0.69□□□□□ -2.3
TOPBP1-205ENST00000506779 SPRR2BP35325 72 aa0.69□□□□□ -2.3
TOPBP1-205ENST00000506779 SPRR2AP35326 72 aa0.69□□□□□ -2.3
TOPBP1-205ENST00000506779 MT1MQ8N339 61 aa0.69□□□□□ -2.3
TOPBP1-205ENST00000506779 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
TOPBP1-205ENST00000506779 SPRR2DP22532 72 aa0.67□□□□□ -2.3
TOPBP1-205ENST00000506779 INE1O15225 51 aa0.66□□□□□ -2.3
TOPBP1-205ENST00000506779 KRTAP2-1Q9BYU5 128 aa0.66□□□□□ -2.3
TOPBP1-205ENST00000506779 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
TOPBP1-205ENST00000506779 MT1AP04731 61 aa0.63□□□□□ -2.31
TOPBP1-205ENST00000506779 KRTAP6-1Q3LI64 71 aa0.6□□□□□ -2.31
TOPBP1-205ENST00000506779 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
TOPBP1-205ENST00000506779 MT4P47944 62 aa0.57□□□□□ -2.32
TOPBP1-205ENST00000506779 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
TOPBP1-205ENST00000506779 KRTAP20-2Q3LI61 65 aa0.55□□□□□ -2.32
TOPBP1-205ENST00000506779 PRM1P04553 51 aa0.47□□□□□ -2.33
TOPBP1-205ENST00000506779 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
TOPBP1-205ENST00000506779 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 27.6 ms