RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
PDLIM5-209ENST00000506632 A0A0D9SG42 100 aa3.41□□□□□ -1.86
PDLIM5-209ENST00000506632 A0A1B0GU33 70 aa3.41□□□□□ -1.86
PDLIM5-209ENST00000506632 CCDC179H3BU77 68 aa3.39□□□□□ -1.87
PDLIM5-209ENST00000506632 MT1EP04732 61 aa3.39□□□□□ -1.87
PDLIM5-209ENST00000506632 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
PDLIM5-209ENST00000506632 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
PDLIM5-209ENST00000506632 K7ERS5 55 aa3.36□□□□□ -1.87
PDLIM5-209ENST00000506632 SPINT4Q6UDR6 99 aa3.36□□□□□ -1.87
PDLIM5-209ENST00000506632 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
PDLIM5-209ENST00000506632 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-209ENST00000506632 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
PDLIM5-209ENST00000506632 A0A1B0GU69 56 aa3.31□□□□□ -1.88
PDLIM5-209ENST00000506632 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
PDLIM5-209ENST00000506632 A8MU10 97 aa3.29□□□□□ -1.88
PDLIM5-209ENST00000506632 MT1GP13640 62 aa3.28□□□□□ -1.88
PDLIM5-209ENST00000506632 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
PDLIM5-209ENST00000506632 A6NED7 52 aa3.26□□□□□ -1.89
PDLIM5-209ENST00000506632 TMEM258P61165 79 aa3.25□□□□□ -1.89
PDLIM5-209ENST00000506632 MT1LQ93083 61 aa3.24□□□□□ -1.89
PDLIM5-209ENST00000506632 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
PDLIM5-209ENST00000506632 ATP5EP56381 51 aaPredicted RBP3.23□□□□□ -1.89
PDLIM5-209ENST00000506632 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
PDLIM5-209ENST00000506632 MT1MQ8N339 61 aa3.23□□□□□ -1.89
PDLIM5-209ENST00000506632 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
PDLIM5-209ENST00000506632 TNP1P09430 55 aa3.21□□□□□ -1.9
PDLIM5-209ENST00000506632 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
PDLIM5-209ENST00000506632 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
PDLIM5-209ENST00000506632 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
PDLIM5-209ENST00000506632 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
PDLIM5-209ENST00000506632 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
PDLIM5-209ENST00000506632 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
PDLIM5-209ENST00000506632 UQCR11O14957 56 aa3.11□□□□□ -1.91
PDLIM5-209ENST00000506632 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
PDLIM5-209ENST00000506632 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
PDLIM5-209ENST00000506632 MT4P47944 62 aa3.09□□□□□ -1.91
PDLIM5-209ENST00000506632 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
PDLIM5-209ENST00000506632 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
PDLIM5-209ENST00000506632 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
PDLIM5-209ENST00000506632 Q1T7F1 81 aa3□□□□□ -1.93
PDLIM5-209ENST00000506632 KRTAP5-5Q701N2 237 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-209ENST00000506632 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
PDLIM5-209ENST00000506632 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
PDLIM5-209ENST00000506632 KTN1-AS1Q86SY8 53 aa2.95□□□□□ -1.94
PDLIM5-209ENST00000506632 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
PDLIM5-209ENST00000506632 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
PDLIM5-209ENST00000506632 BRK1Q8WUW1 75 aa2.9□□□□□ -1.95
PDLIM5-209ENST00000506632 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
PDLIM5-209ENST00000506632 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
PDLIM5-209ENST00000506632 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
PDLIM5-209ENST00000506632 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
PDLIM5-209ENST00000506632 CDC42SE1Q9NRR8 79 aa2.81□□□□□ -1.96
PDLIM5-209ENST00000506632 ROMO1P60602 79 aa2.77□□□□□ -1.97
PDLIM5-209ENST00000506632 MT1AP04731 61 aa2.76□□□□□ -1.97
PDLIM5-209ENST00000506632 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
PDLIM5-209ENST00000506632 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
PDLIM5-209ENST00000506632 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
PDLIM5-209ENST00000506632 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
PDLIM5-209ENST00000506632 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
PDLIM5-209ENST00000506632 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
PDLIM5-209ENST00000506632 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
PDLIM5-209ENST00000506632 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
PDLIM5-209ENST00000506632 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
PDLIM5-209ENST00000506632 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
PDLIM5-209ENST00000506632 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
PDLIM5-209ENST00000506632 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
PDLIM5-209ENST00000506632 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
PDLIM5-209ENST00000506632 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
PDLIM5-209ENST00000506632 INE1O15225 51 aa2.27□□□□□ -2.05
PDLIM5-209ENST00000506632 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
PDLIM5-209ENST00000506632 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
PDLIM5-209ENST00000506632 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
PDLIM5-209ENST00000506632 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
PDLIM5-209ENST00000506632 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
PDLIM5-209ENST00000506632 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
PDLIM5-209ENST00000506632 PRM1P04553 51 aa1.41□□□□□ -2.18
PDLIM5-209ENST00000506632 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
PDLIM5-209ENST00000506632 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 78.5 ms