RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
SNF8-204ENST00000506104 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
SNF8-204ENST00000506104 PP632Q6XCG6 107 aa3.01□□□□□ -1.93
SNF8-204ENST00000506104 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
SNF8-204ENST00000506104 MT1GP13640 62 aa2.98□□□□□ -1.93
SNF8-204ENST00000506104 A8MU10 97 aa2.97□□□□□ -1.93
SNF8-204ENST00000506104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
SNF8-204ENST00000506104 MT1MQ8N339 61 aa2.95□□□□□ -1.94
SNF8-204ENST00000506104 J3QR89 54 aa2.94□□□□□ -1.94
SNF8-204ENST00000506104 SNURFQ9Y675 71 aa2.94□□□□□ -1.94
SNF8-204ENST00000506104 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
SNF8-204ENST00000506104 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
SNF8-204ENST00000506104 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
SNF8-204ENST00000506104 SPATA8Q6RVD6 105 aa2.92□□□□□ -1.94
SNF8-204ENST00000506104 SERP1Q9Y6X1 66 aa2.92□□□□□ -1.94
SNF8-204ENST00000506104 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
SNF8-204ENST00000506104 A0A1B0GV90 55 aa2.9□□□□□ -1.95
SNF8-204ENST00000506104 MT1LQ93083 61 aa2.9□□□□□ -1.95
SNF8-204ENST00000506104 A0A1B0GU33 70 aa2.89□□□□□ -1.95
SNF8-204ENST00000506104 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
SNF8-204ENST00000506104 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
SNF8-204ENST00000506104 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
SNF8-204ENST00000506104 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
SNF8-204ENST00000506104 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
SNF8-204ENST00000506104 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
SNF8-204ENST00000506104 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
SNF8-204ENST00000506104 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SNF8-204ENST00000506104 COA5Q86WW8 74 aa2.84□□□□□ -1.95
SNF8-204ENST00000506104 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
SNF8-204ENST00000506104 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
SNF8-204ENST00000506104 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
SNF8-204ENST00000506104 TNP1P09430 55 aa2.8□□□□□ -1.96
SNF8-204ENST00000506104 TMEM258P61165 79 aa2.76□□□□□ -1.97
SNF8-204ENST00000506104 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SNF8-204ENST00000506104 A0A1B0GU69 56 aa2.73□□□□□ -1.97
SNF8-204ENST00000506104 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
SNF8-204ENST00000506104 SERP2Q8N6R1 65 aa2.73□□□□□ -1.97
SNF8-204ENST00000506104 KRTAP12-3P60328 96 aa2.71□□□□□ -1.98
SNF8-204ENST00000506104 K7ERU9 68 aa2.7□□□□□ -1.98
SNF8-204ENST00000506104 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
SNF8-204ENST00000506104 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SNF8-204ENST00000506104 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
SNF8-204ENST00000506104 COX7CP15954 63 aa2.59□□□□□ -1.99
SNF8-204ENST00000506104 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
SNF8-204ENST00000506104 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
SNF8-204ENST00000506104 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
SNF8-204ENST00000506104 H7BZZ5 65 aa2.57□□□□□ -2
SNF8-204ENST00000506104 ROMO1P60602 79 aa2.53□□□□□ -2
SNF8-204ENST00000506104 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
SNF8-204ENST00000506104 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
SNF8-204ENST00000506104 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
SNF8-204ENST00000506104 Q1T7F1 81 aa2.48□□□□□ -2.01
SNF8-204ENST00000506104 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
SNF8-204ENST00000506104 MT1AP04731 61 aa2.47□□□□□ -2.01
SNF8-204ENST00000506104 UQCR11O14957 56 aa2.46□□□□□ -2.02
SNF8-204ENST00000506104 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
SNF8-204ENST00000506104 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
SNF8-204ENST00000506104 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
SNF8-204ENST00000506104 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
SNF8-204ENST00000506104 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
SNF8-204ENST00000506104 MIR22HGQ0VDD5 57 aa2.41□□□□□ -2.02
SNF8-204ENST00000506104 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
SNF8-204ENST00000506104 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
SNF8-204ENST00000506104 CCDC179H3BU77 68 aa2.37□□□□□ -2.03
SNF8-204ENST00000506104 ATP5EP56381 51 aaPredicted RBP2.37□□□□□ -2.03
SNF8-204ENST00000506104 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
SNF8-204ENST00000506104 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
SNF8-204ENST00000506104 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
SNF8-204ENST00000506104 INE1O15225 51 aa2.25□□□□□ -2.05
SNF8-204ENST00000506104 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
SNF8-204ENST00000506104 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
SNF8-204ENST00000506104 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
SNF8-204ENST00000506104 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SNF8-204ENST00000506104 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SNF8-204ENST00000506104 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
SNF8-204ENST00000506104 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SNF8-204ENST00000506104 PRM1P04553 51 aa1.13□□□□□ -2.23
SNF8-204ENST00000506104 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms